Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AL356292.1-201ENST00000283110 373 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 RNU6-271P-201ENST00000363858 105 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 SNORD116-14-201ENST00000383894 92 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 SNORD116-17-201ENST00000383929 92 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 SNORD116-15-201ENST00000384445 92 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 SNORD116-19-201ENST00000384729 92 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 MIR1278-201ENST00000408753 81 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 RNA5SP492-201ENST00000411330 114 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 RNU6-57P-201ENST00000411348 103 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 RNU6-1211P-201ENST00000459179 105 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC092991.1-201ENST00000477176 376 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC245166.1-201ENST00000521012 253 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC027419.1-201ENST00000522976 328 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC127455.1-201ENST00000565496 145 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 MIR5195-201ENST00000583555 115 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 POLR3GP1-201ENST00000594073 261 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AC073476.4-201ENST00000628409 72 ntBASIC2.75□□□□□ -1.97
NEIL1Q96FI4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
NEIL1Q96FI4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.74□□□□□ -1.97
NEIL1Q96FI4 SNORD31B-201ENST00000364977 69 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 MIR539-201ENST00000365690 78 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 SNORD20-201ENST00000384550 80 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 RNU4-43P-201ENST00000410628 137 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 RPL36AP21-201ENST00000490372 323 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.74□□□□□ -1.97
NEIL1Q96FI4 SNORA70.24-201ENST00000517233 118 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 MIR5680-201ENST00000577577 84 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 MIR3646-201ENST00000578301 84 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 uc_338.1-201ENST00000612113 180 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 MIR6844-201ENST00000637122 62 ntBASIC2.74□□□□□ -1.97
NEIL1Q96FI4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.74□□□□□ -1.97
NEIL1Q96FI4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 Y_RNA.273-201ENST00000364703 102 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 RNY3P5-201ENST00000384127 102 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 RNU6-460P-201ENST00000391158 108 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 AL031121.1-201ENST00000406553 254 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 AL135786.1-201ENST00000415892 214 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 BX510359.1-201ENST00000456973 237 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 RPL23AP54-201ENST00000495129 419 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 RNA5SP20-201ENST00000515976 84 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 RNU6-63P-201ENST00000516690 95 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 AC005972.2-201ENST00000604690 348 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 AC093732.2-201ENST00000607950 274 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.73□□□□□ -1.97
NEIL1Q96FI4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEIL1Q96FI4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RNY1P11-201ENST00000363759 113 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RNU6-215P-201ENST00000365169 102 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 Y_RNA.353-201ENST00000365440 108 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 Y_RNA.393-201ENST00000383936 102 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 Y_RNA.521-201ENST00000384560 114 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RNU4-47P-201ENST00000410876 114 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RPL32P35-201ENST00000415214 394 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RPL23AP83-201ENST00000434984 473 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RPS27P1-201ENST00000450552 247 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RNU6-437P-201ENST00000459408 95 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RNU7-116P-201ENST00000516940 62 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 RNU6-586P-201ENST00000517265 104 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 AL359881.1-201ENST00000602916 267 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 MIR7112-201ENST00000616126 65 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 TUG1_4.1-201ENST00000619464 181 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 AL355596.1-201ENST00000565399 3996 ntBASIC2.72□□□□□ -1.97
NEIL1Q96FI4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.72□□□□□ -1.97
NEIL1Q96FI4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms