Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL157831.1-201ENST00000426134 473 ntBASIC4.3□□□□□ -1.72
PTCD2Q8WV60 RN7SL691P-201ENST00000494487 301 ntBASIC4.3□□□□□ -1.72
PTCD2Q8WV60 MIR6716-201ENST00000613413 80 ntBASIC4.3□□□□□ -1.72
PTCD2Q8WV60 AC006111.3-201ENST00000622137 383 ntBASIC4.3□□□□□ -1.72
PTCD2Q8WV60 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PTCD2Q8WV60 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 Y_RNA.336-201ENST00000365307 109 ntBASIC4.29□□□□□ -1.72
PTCD2Q8WV60 RNA5SP323-201ENST00000391094 133 ntBASIC4.29□□□□□ -1.72
PTCD2Q8WV60 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 AC004975.1-201ENST00000428733 208 ntBASIC4.29□□□□□ -1.72
PTCD2Q8WV60 SNRPGP14-201ENST00000435400 219 ntBASIC4.29□□□□□ -1.72
PTCD2Q8WV60 MIR548BB-201ENST00000626714 66 ntBASIC4.29□□□□□ -1.72
PTCD2Q8WV60 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PTCD2Q8WV60 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 Y_RNA.191-201ENST00000363972 113 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 Y_RNA.332-201ENST00000365271 113 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 RNU6-1201P-201ENST00000384227 107 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 SNORD77B-201ENST00000391112 67 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 HSPE1P26-201ENST00000405341 275 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 RNU4-69P-201ENST00000410677 143 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 AL353813.1-201ENST00000440700 253 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 AL161788.1-201ENST00000441805 169 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 RNU7-94P-201ENST00000459576 63 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 SNORD45.4-201ENST00000516629 73 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 MIR3653-201ENST00000625572 110 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 AL512310.12-203ENST00000640543 90 ntBASIC4.28□□□□□ -1.72
PTCD2Q8WV60 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTCD2Q8WV60 AC017071.1-201ENST00000564407 2204 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTCD2Q8WV60 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD2Q8WV60 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD2Q8WV60 SNORD58A-201ENST00000383875 65 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 RPL32P35-201ENST00000415214 394 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 RPS26P15-201ENST00000488067 348 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 SNORA31.9-201ENST00000516429 84 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 RNA5SP49-201ENST00000516450 115 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 RNA5SP519-201ENST00000516480 119 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 MIR4762-201ENST00000585261 75 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 AC021613.1-201ENST00000623880 111 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD2Q8WV60 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
PTCD2Q8WV60 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD2Q8WV60 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTCD2Q8WV60 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTCD2Q8WV60 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
PTCD2Q8WV60 AC002546.1-201ENST00000588041 2504 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 AC009969.1-201ENST00000438726 172 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 AL031183.1-201ENST00000457667 207 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 RNU6-991P-201ENST00000516168 107 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 RNU6-1041P-201ENST00000516254 102 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 MRPL49P2-201ENST00000521066 465 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 AC068724.3-201ENST00000625906 87 ntBASIC4.26□□□□□ -1.73
PTCD2Q8WV60 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.26□□□□□ -1.73
PTCD2Q8WV60 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.26□□□□□ -1.73
PTCD2Q8WV60 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PTCD2Q8WV60 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTCD2Q8WV60 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.26□□□□□ -1.73
PTCD2Q8WV60 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 RNU1-14P-201ENST00000362759 152 ntBASIC4.25□□□□□ -1.73
PTCD2Q8WV60 SNORA27-201ENST00000384323 126 ntBASIC4.25□□□□□ -1.73
PTCD2Q8WV60 SNORA80E-201ENST00000384744 137 ntBASIC4.25□□□□□ -1.73
PTCD2Q8WV60 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 RN7SL600P-201ENST00000581811 299 ntBASIC4.25□□□□□ -1.73
PTCD2Q8WV60 MIR4439-201ENST00000583746 80 ntBASIC4.25□□□□□ -1.73
PTCD2Q8WV60 ELOCP29-201ENST00000588193 334 ntBASIC4.25□□□□□ -1.73
PTCD2Q8WV60 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.25□□□□□ -1.73
PTCD2Q8WV60 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.24□□□□□ -1.73
PTCD2Q8WV60 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms