Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM48Q8IWZ4 MIR3684-201ENST00000579779 74 ntBASIC2.89□□□□□ -1.95
TRIM48Q8IWZ4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.89□□□□□ -1.95
TRIM48Q8IWZ4 MIR7106-201ENST00000612419 65 ntBASIC2.89□□□□□ -1.95
TRIM48Q8IWZ4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRIM48Q8IWZ4 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
TRIM48Q8IWZ4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 AC073325.2-201ENST00000339545 159 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 RNU4-84P-201ENST00000364200 139 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 SNORA9.2-201ENST00000365361 133 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-851P-201ENST00000384565 107 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-136P-201ENST00000384663 107 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 AC016909.1-201ENST00000415916 166 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 TRIAP1P1-201ENST00000427062 225 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 AC025750.2-201ENST00000442609 450 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 UQCRHP3-201ENST00000451503 251 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 RPS26P55-201ENST00000471178 356 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 AC022616.8-201ENST00000533569 253 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 EIF4BP1-201ENST00000554881 351 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 AC090616.3-201ENST00000582184 217 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 MIR548AY-201ENST00000617669 107 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM48Q8IWZ4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 SNORA36B-201ENST00000410438 131 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 RNA5SP344-201ENST00000411081 104 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 CR769767.1-201ENST00000436337 346 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 RN7SL633P-201ENST00000488974 297 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-991P-201ENST00000516168 107 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 RNU7-115P-201ENST00000516433 55 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 MIR4724-201ENST00000579485 89 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 Z82209.1-201ENST00000422141 2135 ntBASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM48Q8IWZ4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-103P-201ENST00000363686 107 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 Y_RNA.229-201ENST00000364347 113 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 MIR526A2-201ENST00000390198 65 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 RNA5SP511-201ENST00000410487 115 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 HSPE1P13-201ENST00000451143 297 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 AC080013.2-201ENST00000460866 323 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 AP001486.1-201ENST00000463339 476 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 AC010531.2-201ENST00000465012 153 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 RNA5SP272-201ENST00000516095 111 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-561P-201ENST00000516222 102 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 SNORD116-25-201ENST00000516517 92 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 POLR3GP1-201ENST00000594073 261 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 MTND1P7-201ENST00000632801 297 ntBASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM48Q8IWZ4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 MIR367-201ENST00000362299 68 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 SNORD114-7-201ENST00000362520 77 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-271P-201ENST00000363858 105 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-151P-201ENST00000364158 107 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-1235P-201ENST00000384559 107 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 EBAG9P1-201ENST00000418955 543 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 AC107083.1-201ENST00000439643 279 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-498P-201ENST00000459468 107 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 RPS27P22-201ENST00000478056 241 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 AC109810.1-201ENST00000534066 224 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 AL355297.2-201ENST00000604792 129 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 AC090115.4-201ENST00000609970 188 ntBASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM48Q8IWZ4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-144P-201ENST00000383951 107 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 Y_RNA.400-201ENST00000383963 111 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 MIR616-201ENST00000385293 97 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-220P-201ENST00000390919 107 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-239P-201ENST00000390990 99 ntBASIC2.84□□□□□ -1.95
TRIM48Q8IWZ4 RNU6-131P-201ENST00000391144 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms