Protein–RNA interactions for Protein: Q86UT5

PDZD3, Na(+)/H(+) exchange regulatory cofactor NHE-RF4, humanhuman

Predictions only

Length 571 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3Q86UT5 RNU4-57P-201ENST00000515980 135 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 RNU6-63P-201ENST00000516690 95 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 RNU2-56P-201ENST00000516826 190 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 SCARNA3-201ENST00000517097 143 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.33□□□□□ -1.88
PDZD3Q86UT5 MIR378D2-201ENST00000580636 98 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 AC023043.3-201ENST00000593113 385 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 AL031274.2-201ENST00000599419 203 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 CENPCP1-201ENST00000533085 2578 ntBASIC3.33□□□□□ -1.88
PDZD3Q86UT5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PDZD3Q86UT5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 RNU6-597P-201ENST00000365620 102 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 SNORA72-201ENST00000384339 132 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 RNU6-460P-201ENST00000391158 108 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 RAC1P5-201ENST00000512182 576 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 RNA5SP490-201ENST00000517141 136 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 MIR2681-201ENST00000581814 105 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 AC105245.1-201ENST00000581934 244 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 U7.2-201ENST00000607576 63 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 MIR5739-201ENST00000619803 80 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 AC002064.3-201ENST00000623448 346 ntBASIC3.32□□□□□ -1.88
PDZD3Q86UT5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDZD3Q86UT5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.31□□□□□ -1.88
PDZD3Q86UT5 RNU1-72P-201ENST00000362976 153 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 RNU6-546P-201ENST00000383991 107 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 Y_RNA.432-201ENST00000384087 111 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 SNORA44-201ENST00000384584 132 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 MIR218-1-201ENST00000384999 110 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 MIR1278-201ENST00000408753 81 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 RNA5SP511-201ENST00000410487 115 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 AC245047.4-201ENST00000433189 144 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
PDZD3Q86UT5 RPS29P21-201ENST00000496272 170 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 SEM1P1-201ENST00000506694 209 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 RNU6-965P-201ENST00000516721 96 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.31□□□□□ -1.88
PDZD3Q86UT5 AC015720.1-201ENST00000565251 277 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 MIR3199-1-201ENST00000582434 88 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.31□□□□□ -1.88
PDZD3Q86UT5 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 AC093732.2-201ENST00000607950 274 ntBASIC3.31□□□□□ -1.88
PDZD3Q86UT5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDZD3Q86UT5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.31□□□□□ -1.88
PDZD3Q86UT5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PDZD3Q86UT5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 RNU6-215P-201ENST00000365169 102 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 HMGN2P18-201ENST00000450680 270 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 SNRPGP8-201ENST00000454064 226 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 CYP2C59P-201ENST00000457790 269 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 RN7SKP179-201ENST00000516126 217 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 Y_RNA.686-201ENST00000516548 134 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 RNU6-197P-201ENST00000516680 100 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 MIR4435-1-201ENST00000582552 80 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 MIR7515-201ENST00000637837 67 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 AC080128.1-201ENST00000474389 1917 ntBASIC3.3□□□□□ -1.88
PDZD3Q86UT5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDZD3Q86UT5 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PDZD3Q86UT5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDZD3Q86UT5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDZD3Q86UT5 RNU6-834P-201ENST00000362367 110 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 SNORA25.7-201ENST00000364375 127 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 RNU6-117P-201ENST00000365415 107 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PDZD3Q86UT5 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 SNORA4.4-201ENST00000515921 135 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 RNU6-1299P-201ENST00000516316 100 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 MIR3162-201ENST00000581818 82 ntBASIC3.29□□□□□ -1.88
PDZD3Q86UT5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.29□□□□□ -1.88
PDZD3Q86UT5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
PDZD3Q86UT5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
PDZD3Q86UT5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDZD3Q86UT5 CD24P4-201ENST00000382840 243 ntBASIC3.28□□□□□ -1.88
PDZD3Q86UT5 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
PDZD3Q86UT5 Y_RNA.584-201ENST00000391090 114 ntBASIC3.28□□□□□ -1.88
PDZD3Q86UT5 FO393413.1-201ENST00000402892 195 ntBASIC3.28□□□□□ -1.88
PDZD3Q86UT5 RNU2-32P-201ENST00000411193 191 ntBASIC3.28□□□□□ -1.88
PDZD3Q86UT5 AC006539.3-201ENST00000454258 129 ntBASIC3.28□□□□□ -1.88
PDZD3Q86UT5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.28□□□□□ -1.88
PDZD3Q86UT5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms