Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PCNPP5-201ENST00000452246 481 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 Y_RNA.635-201ENST00000459041 101 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 RNU6-625P-201ENST00000459412 107 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 AC074133.1-201ENST00000515696 183 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 RN7SKP49-201ENST00000516675 260 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.4□□□□□ -2.19
SCN1BQ07699 AL512310.8-201ENST00000550183 120 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 MIR502-201ENST00000606349 86 ntBASIC1.4□□□□□ -2.19
SCN1BQ07699 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCN1BQ07699 Y_RNA.166-201ENST00000363730 102 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 RNU6-99P-201ENST00000364721 107 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 Y_RNA.599-201ENST00000410489 109 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 RN7SKP101-201ENST00000411376 320 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 MTCO3P19-201ENST00000415864 321 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 AC018865.2-201ENST00000423631 129 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 RPL30P7-201ENST00000479312 323 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN1BQ07699 SNORA40.9-201ENST00000515895 93 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 SNORA25.15-201ENST00000516487 89 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 Y_RNA.691-201ENST00000516611 103 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 AP002001.1-203ENST00000534002 267 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.39□□□□□ -2.19
SCN1BQ07699 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 MIR6079-201ENST00000635807 62 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 TPTEP1-208ENST00000636884 213 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 AC092881.1-201ENST00000638218 2733 ntBASIC1.39□□□□□ -2.19
SCN1BQ07699 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SCN1BQ07699 AC006026.1-201ENST00000444025 1803 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 MTND5P10-201ENST00000603719 1809 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 MIR504-201ENST00000385065 83 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 MTCYBP4-201ENST00000401524 249 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 RNU6-370P-201ENST00000411008 104 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.38□□□□□ -2.19
SCN1BQ07699 SDAD1P3-201ENST00000427380 333 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AL121890.1-201ENST00000435457 205 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
SCN1BQ07699 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.38□□□□□ -2.19
SCN1BQ07699 MIR2053-201ENST00000459295 91 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN1BQ07699 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN1BQ07699 RNU6-120P-201ENST00000516077 103 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 RNU1-41P-201ENST00000516161 162 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 RNU1-48P-201ENST00000516400 162 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AC016727.1-205ENST00000605437 569 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AC073349.3-201ENST00000617616 186 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AL513423.1-201ENST00000621695 132 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AL359757.2-201ENST00000624309 274 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 SNORD3E-202ENST00000627253 216 ntBASIC1.38□□□□□ -2.19
SCN1BQ07699 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.38□□□□□ -2.19
SCN1BQ07699 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SCN1BQ07699 SNORA27.1-201ENST00000362604 124 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 RAB28P5-201ENST00000427490 651 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.37□□□□□ -2.19
SCN1BQ07699 RNA5SP20-201ENST00000515976 84 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 RNU6-295P-201ENST00000516901 104 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 RNU6-250P-201ENST00000516958 103 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 RPL21P9-201ENST00000556149 474 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 MIR3684-201ENST00000579779 74 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 MIR6845-201ENST00000613182 61 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 AC106754.2-201ENST00000623006 233 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 MIR3674-201ENST00000636576 68 ntBASIC1.37□□□□□ -2.19
SCN1BQ07699 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SCN1BQ07699 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SCN1BQ07699 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SCN1BQ07699 SNORD81.2-201ENST00000365153 76 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 RNU6-376P-201ENST00000384731 106 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SCN1BQ07699 U8.13-201ENST00000390842 128 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 AL627390.1-201ENST00000396055 340 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 AC114482.1-201ENST00000418010 247 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.36□□□□□ -2.19
SCN1BQ07699 AC091021.1-201ENST00000468051 388 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 AC092991.1-201ENST00000477176 376 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 MIR4778-201ENST00000577635 80 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 AL162424.1-201ENST00000602325 221 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 U6.115-201ENST00000636045 103 ntBASIC1.36□□□□□ -2.19
SCN1BQ07699 MIR410-201ENST00000362222 80 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 Y_RNA.267-201ENST00000364679 109 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 RNU6-505P-201ENST00000384427 107 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 MIR660-201ENST00000385235 97 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 SNORD12B-201ENST00000410433 91 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 RN7SKP51-201ENST00000410781 304 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 Y_RNA.646-201ENST00000410980 101 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 RNU6-1304P-201ENST00000411374 106 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 RNU2-56P-201ENST00000516826 190 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.35□□□□□ -2.19
SCN1BQ07699 AP003033.1-201ENST00000527244 415 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 AL161670.1-201ENST00000554348 137 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 MIR3664-201ENST00000579074 99 ntBASIC1.35□□□□□ -2.19
SCN1BQ07699 SNORA28-201ENST00000606769 126 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms