Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.54□□□□□ -1.84
XPCQ01831 PIGPP3-201ENST00000425307 415 ntBASIC3.54□□□□□ -1.84
XPCQ01831 PRELID3BP1-201ENST00000457142 540 ntBASIC3.54□□□□□ -1.84
XPCQ01831 RNU6-991P-201ENST00000516168 107 ntBASIC3.54□□□□□ -1.84
XPCQ01831 RN7SKP43-201ENST00000516173 320 ntBASIC3.54□□□□□ -1.84
XPCQ01831 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.54□□□□□ -1.84
XPCQ01831 MIR3117-201ENST00000584034 78 ntBASIC3.54□□□□□ -1.84
XPCQ01831 MIR3616-201ENST00000584070 92 ntBASIC3.54□□□□□ -1.84
XPCQ01831 AL355297.2-201ENST00000604792 129 ntBASIC3.54□□□□□ -1.84
XPCQ01831 snoZ196.1-201ENST00000625269 89 ntBASIC3.54□□□□□ -1.84
XPCQ01831 snoU18.1-201ENST00000629629 71 ntBASIC3.54□□□□□ -1.84
XPCQ01831 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
XPCQ01831 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
XPCQ01831 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.53□□□□□ -1.84
XPCQ01831 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
XPCQ01831 RNU6-743P-201ENST00000364151 106 ntBASIC3.53□□□□□ -1.84
XPCQ01831 SNORD14D-201ENST00000384390 87 ntBASIC3.53□□□□□ -1.84
XPCQ01831 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.53□□□□□ -1.84
XPCQ01831 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.53□□□□□ -1.84
XPCQ01831 HMGN2P3-201ENST00000433603 273 ntBASIC3.53□□□□□ -1.84
XPCQ01831 HMGN2P5-201ENST00000436882 273 ntBASIC3.53□□□□□ -1.84
XPCQ01831 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.53□□□□□ -1.84
XPCQ01831 AC016717.1-201ENST00000448918 286 ntBASIC3.53□□□□□ -1.84
XPCQ01831 Y_RNA.644-201ENST00000459006 113 ntBASIC3.53□□□□□ -1.84
XPCQ01831 RN7SL499P-201ENST00000481141 276 ntBASIC3.53□□□□□ -1.84
XPCQ01831 RN7SL636P-201ENST00000497504 294 ntBASIC3.53□□□□□ -1.84
XPCQ01831 Y_RNA.674-201ENST00000516362 113 ntBASIC3.53□□□□□ -1.84
XPCQ01831 RNA5SP490-201ENST00000517141 136 ntBASIC3.53□□□□□ -1.84
XPCQ01831 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.53□□□□□ -1.84
XPCQ01831 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.53□□□□□ -1.84
XPCQ01831 MIR3684-201ENST00000579779 74 ntBASIC3.53□□□□□ -1.84
XPCQ01831 AC004792.1-201ENST00000614523 137 ntBASIC3.53□□□□□ -1.84
XPCQ01831 AC073349.3-201ENST00000617616 186 ntBASIC3.53□□□□□ -1.84
XPCQ01831 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.53□□□□□ -1.84
XPCQ01831 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
XPCQ01831 MIR26A1-201ENST00000362205 77 ntBASIC3.52□□□□□ -1.85
XPCQ01831 Y_RNA.361-201ENST00000365515 120 ntBASIC3.52□□□□□ -1.85
XPCQ01831 MIR27B-201ENST00000385129 97 ntBASIC3.52□□□□□ -1.85
XPCQ01831 AL357139.1-201ENST00000407792 426 ntBASIC3.52□□□□□ -1.85
XPCQ01831 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.52□□□□□ -1.85
XPCQ01831 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.52□□□□□ -1.85
XPCQ01831 AC024405.2-202ENST00000532731 184 ntBASIC3.52□□□□□ -1.85
XPCQ01831 AC090115.4-201ENST00000609970 188 ntBASIC3.52□□□□□ -1.85
XPCQ01831 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
XPCQ01831 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-1272P-201ENST00000362776 107 ntBASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-418P-201ENST00000384035 107 ntBASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-211P-201ENST00000384047 107 ntBASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-209P-201ENST00000384118 107 ntBASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-710P-201ENST00000410424 105 ntBASIC3.51□□□□□ -1.85
XPCQ01831 Y_RNA.793-201ENST00000411222 111 ntBASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-57P-201ENST00000411348 103 ntBASIC3.51□□□□□ -1.85
XPCQ01831 SUMO1P2-201ENST00000452524 304 ntBASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-221P-201ENST00000459541 99 ntBASIC3.51□□□□□ -1.85
XPCQ01831 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.51□□□□□ -1.85
XPCQ01831 RNU6-948P-201ENST00000516374 107 ntBASIC3.51□□□□□ -1.85
XPCQ01831 AC007536.1-201ENST00000533382 349 ntBASIC3.51□□□□□ -1.85
XPCQ01831 CBX3P4-201ENST00000538909 354 ntBASIC3.51□□□□□ -1.85
XPCQ01831 PRELID2P1-201ENST00000552837 301 ntBASIC3.51□□□□□ -1.85
XPCQ01831 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.51□□□□□ -1.85
XPCQ01831 DEFB122-202ENST00000569013 197 ntBASIC3.51□□□□□ -1.85
XPCQ01831 AC009127.3-201ENST00000570531 403 ntBASIC3.51□□□□□ -1.85
XPCQ01831 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.51□□□□□ -1.85
XPCQ01831 U4.3-201ENST00000621047 82 ntBASIC3.51□□□□□ -1.85
XPCQ01831 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.51□□□□□ -1.85
XPCQ01831 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
XPCQ01831 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
XPCQ01831 RNU2-48P-201ENST00000410694 191 ntBASIC3.5□□□□□ -1.85
XPCQ01831 BTF3P11-201ENST00000426582 477 ntBASIC3.5□□□□□ -1.85
XPCQ01831 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.5□□□□□ -1.85
XPCQ01831 RPS29P6-201ENST00000438196 145 ntBASIC3.5□□□□□ -1.85
XPCQ01831 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.5□□□□□ -1.85
XPCQ01831 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.5□□□□□ -1.85
XPCQ01831 RNU6-548P-201ENST00000517083 115 ntBASIC3.5□□□□□ -1.85
XPCQ01831 RN7SKP40-201ENST00000517211 242 ntBASIC3.5□□□□□ -1.85
XPCQ01831 AC090616.3-201ENST00000582184 217 ntBASIC3.5□□□□□ -1.85
XPCQ01831 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.5□□□□□ -1.85
XPCQ01831 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
XPCQ01831 RNA5SP125-201ENST00000364843 120 ntBASIC3.49□□□□□ -1.85
XPCQ01831 U8.9-201ENST00000365667 134 ntBASIC3.49□□□□□ -1.85
XPCQ01831 MIR561-201ENST00000385216 97 ntBASIC3.49□□□□□ -1.85
XPCQ01831 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
XPCQ01831 AL355796.1-201ENST00000406706 323 ntBASIC3.49□□□□□ -1.85
XPCQ01831 AL135790.2-201ENST00000437701 267 ntBASIC3.49□□□□□ -1.85
XPCQ01831 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.49□□□□□ -1.85
XPCQ01831 Y_RNA.676-201ENST00000516393 96 ntBASIC3.49□□□□□ -1.85
XPCQ01831 Z83818.1-201ENST00000603584 150 ntBASIC3.49□□□□□ -1.85
XPCQ01831 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.49□□□□□ -1.85
XPCQ01831 AL008718.3-201ENST00000610217 321 ntBASIC3.49□□□□□ -1.85
XPCQ01831 FTX_2.1-201ENST00000618816 94 ntBASIC3.49□□□□□ -1.85
XPCQ01831 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.49□□□□□ -1.85
XPCQ01831 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
XPCQ01831 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
XPCQ01831 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.48□□□□□ -1.85
XPCQ01831 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
XPCQ01831 RNU6-801P-201ENST00000364087 105 ntBASIC3.48□□□□□ -1.85
XPCQ01831 RNU6-1235P-201ENST00000384559 107 ntBASIC3.48□□□□□ -1.85
XPCQ01831 AC092427.1-202ENST00000430569 476 ntBASIC3.48□□□□□ -1.85
XPCQ01831 Y_RNA.637-201ENST00000459424 114 ntBASIC3.48□□□□□ -1.85
XPCQ01831 RNU6-498P-201ENST00000459468 107 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms