Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CLCNKAP51800 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLCNKAP51800 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLCNKAP51800 LINC02555-201ENST00000563933 1951 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 Y_RNA.183-201ENST00000363882 113 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 SNORD114-6-201ENST00000364393 72 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 Y_RNA.512-201ENST00000384518 102 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 RNU6-1105P-201ENST00000384774 107 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 snosnR66.1-201ENST00000391095 99 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 MIR1185-2-201ENST00000408687 86 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 RNU6-121P-201ENST00000410525 99 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.02□□□□□ -2.09
CLCNKAP51800 AL358176.2-201ENST00000425769 204 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 TOMM22P2-201ENST00000430735 237 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 NDUFB4P10-201ENST00000452541 359 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 HMGN1P10-201ENST00000474557 553 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 RNU6-966P-201ENST00000516479 104 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AL117187.1-201ENST00000555482 181 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AC008269.2-201ENST00000561915 1105 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.02□□□□□ -2.09
CLCNKAP51800 AC005176.2-201ENST00000596933 147 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.02□□□□□ -2.09
CLCNKAP51800 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AC004467.1-201ENST00000615678 330 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AL590240.4-201ENST00000616908 390 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 AC130454.1-201ENST00000622948 401 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 snoZ196.1-201ENST00000625269 89 ntBASIC2.02□□□□□ -2.09
CLCNKAP51800 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.02□□□□□ -2.09
CLCNKAP51800 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.02□□□□□ -2.09
CLCNKAP51800 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
CLCNKAP51800 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CLCNKAP51800 Y_RNA.19-201ENST00000362462 99 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 Y_RNA.64-201ENST00000362845 102 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 Y_RNA.101-201ENST00000363154 102 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 RNU6-238P-201ENST00000363313 106 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 Y_RNA.152-201ENST00000363578 100 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 RNU6-454P-201ENST00000364292 107 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 RNU6-1164P-201ENST00000364428 107 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 SNORA72.2-201ENST00000365028 127 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 RNU2-2P-201ENST00000410396 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.01□□□□□ -2.09
CLCNKAP51800 AC074290.1-201ENST00000448883 135 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 UBL5P3-201ENST00000475112 231 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 Y_RNA.713-201ENST00000517013 96 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 MIR4423-201ENST00000580922 80 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 MIR4300-201ENST00000581016 96 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 AC002984.1-201ENST00000591692 448 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.15-201ENST00000611544 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.16-201ENST00000613119 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.12-201ENST00000613778 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.20-201ENST00000613956 192 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.9-201ENST00000615427 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.11-201ENST00000616345 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.2-201ENST00000616535 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 MIR376A1-201ENST00000616574 68 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.3-201ENST00000617785 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.19-201ENST00000618602 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 RNU2-1-201ENST00000618664 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.6-201ENST00000619225 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.5-201ENST00000619465 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 U2.10-201ENST00000620268 191 ntBASIC2.01□□□□□ -2.09
CLCNKAP51800 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLCNKAP51800 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CLCNKAP51800 ZNF702P-202ENST00000434269 1966 ntBASIC2□□□□□ -2.09
CLCNKAP51800 MIR410-201ENST00000362222 80 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RNU6-770P-201ENST00000363929 105 ntBASIC2□□□□□ -2.09
CLCNKAP51800 Y_RNA.276-201ENST00000364732 109 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RNU6-1235P-201ENST00000384559 107 ntBASIC2□□□□□ -2.09
CLCNKAP51800 Y_RNA.570-201ENST00000384750 101 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RNU6-1109P-201ENST00000391187 107 ntBASIC2□□□□□ -2.09
CLCNKAP51800 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLCNKAP51800 RNU4-30P-201ENST00000410245 143 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RNA5SP475-201ENST00000410568 110 ntBASIC2□□□□□ -2.09
CLCNKAP51800 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
CLCNKAP51800 AC016909.1-201ENST00000415916 166 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RPL21P38-201ENST00000418090 167 ntBASIC2□□□□□ -2.09
CLCNKAP51800 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
CLCNKAP51800 AL353689.1-201ENST00000438895 199 ntBASIC2□□□□□ -2.09
CLCNKAP51800 DYNLT3P2-201ENST00000442517 295 ntBASIC2□□□□□ -2.09
CLCNKAP51800 AL357134.1-201ENST00000445848 426 ntBASIC2□□□□□ -2.09
CLCNKAP51800 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2□□□□□ -2.09
CLCNKAP51800 RPL23AP3-201ENST00000453844 468 ntBASIC2□□□□□ -2.09
CLCNKAP51800 LINC01399-202ENST00000458450 244 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RNU6-498P-201ENST00000459468 107 ntBASIC2□□□□□ -2.09
CLCNKAP51800 RNU6-948P-201ENST00000516374 107 ntBASIC2□□□□□ -2.09
CLCNKAP51800 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
CLCNKAP51800 AC006001.4-201ENST00000622243 395 ntBASIC2□□□□□ -2.09
CLCNKAP51800 Y_RNA.133-201ENST00000363428 110 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 Y_RNA.222-201ENST00000364264 102 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 RNU6-1175P-201ENST00000365200 107 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 AL158823.1-201ENST00000418441 478 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 BX510359.4-201ENST00000423750 193 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 RPL23AP6-201ENST00000446637 472 ntBASIC1.99□□□□□ -2.09
CLCNKAP51800 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms