Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-727P-201ENST00000363592 107 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 RNU5F-3P-201ENST00000363767 117 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 Y_RNA.237-201ENST00000364439 102 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 Y_RNA.319-201ENST00000365138 92 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 MIR549A-201ENST00000385268 96 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 RN7SKP61-201ENST00000410642 295 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 HMGN2P10-201ENST00000448085 265 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.99□□□□□ -2.09
CACNA1FO60840 AC108729.3-201ENST00000513484 108 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 SCARNA17.1-201ENST00000516211 143 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 RNU4-71P-201ENST00000516258 113 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 SCARNA17.2-201ENST00000516334 143 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.99□□□□□ -2.09
CACNA1FO60840 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.99□□□□□ -2.09
CACNA1FO60840 MIR4659A-201ENST00000580269 81 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 MIR5194-201ENST00000582634 120 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 MIR3136-201ENST00000583498 78 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 AL138963.2-201ENST00000605137 226 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 AC037487.3-201ENST00000606668 112 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 Y_RNA.772-201ENST00000606692 102 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 snoU13.31-201ENST00000607291 104 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 SCARNA17.4-201ENST00000614296 143 ntBASIC1.99□□□□□ -2.09
CACNA1FO60840 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CACNA1FO60840 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.98□□□□□ -2.09
CACNA1FO60840 MIR378A-201ENST00000362177 66 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 RNU6-529P-201ENST00000363383 104 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 RNU6-461P-201ENST00000364195 107 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 SNORA67.1-201ENST00000364749 141 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 MIR487A-201ENST00000385009 80 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC007395.1-201ENST00000451333 677 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.98□□□□□ -2.09
CACNA1FO60840 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.98□□□□□ -2.09
CACNA1FO60840 RPL36AP21-201ENST00000490372 323 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC010469.2-201ENST00000496412 480 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.98□□□□□ -2.09
CACNA1FO60840 HMGB3P3-201ENST00000510526 400 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC006199.1-201ENST00000548728 219 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC005828.6-201ENST00000606610 232 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
CACNA1FO60840 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CACNA1FO60840 RNA5SP361-201ENST00000362686 118 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 RNU6-270P-201ENST00000364131 105 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 RNU6-378P-201ENST00000384324 107 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 MIR524-201ENST00000385242 87 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CACNA1FO60840 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 RNU5A-5P-201ENST00000411054 116 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC009310.1-201ENST00000414414 451 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CACNA1FO60840 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.98□□□□□ -2.09
CACNA1FO60840 SNORA40.9-201ENST00000515895 93 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 SNORA25.14-201ENST00000516481 132 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 MIR3923-201ENST00000579521 83 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC012433.1-201ENST00000588916 398 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC022441.3-201ENST00000605737 136 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 AC005520.5-201ENST00000613926 164 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
CACNA1FO60840 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CACNA1FO60840 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CACNA1FO60840 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CACNA1FO60840 AL359854.1-201ENST00000614203 1594 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 SNORD113-8-201ENST00000363497 74 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 RNU2-64P-201ENST00000411315 191 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 AC023141.4-201ENST00000412031 328 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 AC096649.2-201ENST00000416186 393 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 AL590135.1-201ENST00000422215 156 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 MTCO1P5-201ENST00000433573 344 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.97□□□□□ -2.09
CACNA1FO60840 SNORD113-5-201ENST00000607261 78 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 AC078938.1-201ENST00000620993 318 ntBASIC1.97□□□□□ -2.09
CACNA1FO60840 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.97□□□□□ -2.09
CACNA1FO60840 Y_RNA.383-201ENST00000383855 97 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 Y_RNA.552-201ENST00000384665 112 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 MIR517C-201ENST00000385103 95 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.96□□□□□ -2.1
CACNA1FO60840 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.96□□□□□ -2.1
CACNA1FO60840 RRN3P3-201ENST00000549207 578 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 MIR5006-201ENST00000583027 110 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.96□□□□□ -2.1
CACNA1FO60840 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 RNU6-487P-201ENST00000365430 104 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 RNU2-49P-201ENST00000410666 184 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.96□□□□□ -2.1
CACNA1FO60840 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.96□□□□□ -2.1
CACNA1FO60840 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.96□□□□□ -2.1
CACNA1FO60840 RPL39P29-201ENST00000447779 157 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.96□□□□□ -2.1
CACNA1FO60840 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.96□□□□□ -2.1
CACNA1FO60840 RNU6-496P-201ENST00000516145 99 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 AC121758.2-201ENST00000553271 193 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 MIR4643-201ENST00000577473 78 ntBASIC1.96□□□□□ -2.1
CACNA1FO60840 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.96□□□□□ -2.1
CACNA1FO60840 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.95□□□□□ -2.1
CACNA1FO60840 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CACNA1FO60840 Y_RNA.338-201ENST00000365320 114 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 SNORA36A-201ENST00000384221 132 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 MIR329-1-201ENST00000385028 80 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms