Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 RNA5SP164-201ENST00000516533 110 ntBASIC3.86□□□□□ -1.79
CFAP99D6REC4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.86□□□□□ -1.79
CFAP99D6REC4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CFAP99D6REC4 MIR126-201ENST00000362291 85 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 RNU1-18P-201ENST00000363062 164 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 Y_RNA.213-201ENST00000364178 111 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 Y_RNA.544-201ENST00000384650 113 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 Y_RNA.549-201ENST00000384657 102 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 MIR759-201ENST00000390224 91 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 RN7SL93P-201ENST00000463035 293 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 SNORA40.13-201ENST00000516379 120 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 RNU7-128P-201ENST00000517247 62 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 MIR3160-1-201ENST00000577972 85 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 AC022217.4-201ENST00000604389 163 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 MIR6875-201ENST00000617506 72 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.85□□□□□ -1.79
CFAP99D6REC4 MAPK10-372ENST00000641954 3413 ntBASIC3.85□□□□□ -1.79
CFAP99D6REC4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
CFAP99D6REC4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CFAP99D6REC4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.85□□□□□ -1.79
CFAP99D6REC4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.84□□□□□ -1.79
CFAP99D6REC4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CFAP99D6REC4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CFAP99D6REC4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CFAP99D6REC4 RNU6-640P-201ENST00000363693 105 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 U8.6-201ENST00000364939 135 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 MIR518F-201ENST00000384973 87 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 MIR199A2-201ENST00000385289 110 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 RNU2-63P-201ENST00000410792 194 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 FTH1P12-201ENST00000432137 551 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.84□□□□□ -1.79
CFAP99D6REC4 AL353689.1-201ENST00000438895 199 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 HMGN2P32-201ENST00000444648 269 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 RPL39P34-201ENST00000477141 156 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 CYCSP30-201ENST00000546447 172 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.84□□□□□ -1.79
CFAP99D6REC4 AC134878.1-201ENST00000619901 243 ntBASIC3.84□□□□□ -1.79
CFAP99D6REC4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CFAP99D6REC4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CFAP99D6REC4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.84□□□□□ -1.8
CFAP99D6REC4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CFAP99D6REC4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CFAP99D6REC4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.83□□□□□ -1.8
CFAP99D6REC4 MIR340-201ENST00000362125 95 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 RNU6-294P-201ENST00000364999 102 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 MIR1193-201ENST00000408109 78 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 RNU7-94P-201ENST00000459576 63 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 RNU1-142P-201ENST00000516682 145 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 AL353149.1-201ENST00000610667 244 ntBASIC3.83□□□□□ -1.8
CFAP99D6REC4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CFAP99D6REC4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CFAP99D6REC4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CFAP99D6REC4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CFAP99D6REC4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CFAP99D6REC4 RNU1-23P-201ENST00000363361 144 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 SNORA63.5-201ENST00000363548 123 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 SNORD73B-201ENST00000364394 72 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 SNORD6-201ENST00000365444 73 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 AL590004.2-201ENST00000404787 371 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 SNORA3.3-201ENST00000408712 125 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 AL500522.2-201ENST00000448562 343 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.82□□□□□ -1.8
CFAP99D6REC4 RNU6-240P-201ENST00000516098 97 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 RNU6-970P-201ENST00000516312 107 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 AP002004.2-201ENST00000531656 154 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 VN1R85P-201ENST00000601587 426 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CFAP99D6REC4 AC068647.1-201ENST00000489539 2265 ntBASIC3.82□□□□□ -1.8
CFAP99D6REC4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
CFAP99D6REC4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CFAP99D6REC4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CFAP99D6REC4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
CFAP99D6REC4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CFAP99D6REC4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CFAP99D6REC4 Y_RNA.558-201ENST00000384685 113 ntBASIC3.81□□□□□ -1.8
CFAP99D6REC4 MIR515-2-201ENST00000384883 83 ntBASIC3.81□□□□□ -1.8
CFAP99D6REC4 MIR515-1-201ENST00000384884 83 ntBASIC3.81□□□□□ -1.8
CFAP99D6REC4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CFAP99D6REC4 AL117342.1-201ENST00000404861 406 ntBASIC3.81□□□□□ -1.8
CFAP99D6REC4 RN7SL323P-201ENST00000494712 295 ntBASIC3.81□□□□□ -1.8
CFAP99D6REC4 AC004486.1-201ENST00000546846 233 ntBASIC3.81□□□□□ -1.8
CFAP99D6REC4 AC091544.4-201ENST00000555268 342 ntBASIC3.81□□□□□ -1.8
CFAP99D6REC4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.81□□□□□ -1.8
CFAP99D6REC4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CFAP99D6REC4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.81□□□□□ -1.8
CFAP99D6REC4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.81□□□□□ -1.8
CFAP99D6REC4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CFAP99D6REC4 MAPK10-322ENST00000641485 4530 ntBASIC3.8□□□□□ -1.8
CFAP99D6REC4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CFAP99D6REC4 RNU6-1189P-201ENST00000383958 107 ntBASIC3.8□□□□□ -1.8
CFAP99D6REC4 MIR522-201ENST00000385071 87 ntBASIC3.8□□□□□ -1.8
CFAP99D6REC4 SNORA57.1-201ENST00000391227 145 ntBASIC3.8□□□□□ -1.8
CFAP99D6REC4 EDDM3CP-201ENST00000415977 425 ntBASIC3.8□□□□□ -1.8
CFAP99D6REC4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CFAP99D6REC4 IGKV3-31-201ENST00000523109 329 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms