Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FNDC3AQ9Y2H6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AC138915.1-201ENST00000565427 1685 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 RNU6-235P-201ENST00000362644 107 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 RNU6-484P-201ENST00000384016 107 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 SNORA72-201ENST00000384339 132 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 RNU2-52P-201ENST00000410680 190 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 RNU2-32P-201ENST00000411193 191 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 PHBP14-201ENST00000512887 367 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AC107934.2-201ENST00000518653 310 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 RPL23AP91-201ENST00000569211 455 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 MIR4298-201ENST00000584380 73 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 YPEL5P2-201ENST00000605553 359 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AC090115.4-201ENST00000609970 188 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 MIR8057-201ENST00000620957 69 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AP003355.3-201ENST00000623465 114 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 AC006435.5-201ENST00000624486 112 ntBASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FNDC3AQ9Y2H6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
FNDC3AQ9Y2H6 RNA5SP42-201ENST00000364278 115 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 RNU6-546P-201ENST00000383991 107 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 AC006989.1-201ENST00000427212 131 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 RPS4XP11-201ENST00000446897 772 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 RNU6-1299P-201ENST00000516316 100 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 SCARNA3-201ENST00000517097 143 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 MIR4438-201ENST00000585271 93 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 Z82209.1-201ENST00000422141 2135 ntBASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.52□□□□□ -1.85
FNDC3AQ9Y2H6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 RNU1-22P-201ENST00000363334 158 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 Y_RNA.203-201ENST00000364106 102 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 RNU6-978P-201ENST00000364371 103 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 AC010154.1-201ENST00000425857 269 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 AC245047.4-201ENST00000433189 144 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 RNA5SP76-201ENST00000516277 87 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 MIR7112-201ENST00000616126 65 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 AC009487.4-201ENST00000624969 3585 ntBASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FNDC3AQ9Y2H6 RNU6-1056P-201ENST00000383996 107 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 SNORD17-201ENST00000390930 237 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 U6atac.2-201ENST00000408644 118 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 AC126124.2-201ENST00000413542 321 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 AC025750.2-201ENST00000442609 450 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 AP001486.1-201ENST00000463339 476 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 AL049873.1-201ENST00000480540 376 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 AC097462.1-201ENST00000514125 324 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 RNU7-172P-201ENST00000517125 64 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 AC105245.1-201ENST00000581934 244 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 AC110741.2-201ENST00000605278 268 ntBASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FNDC3AQ9Y2H6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 U8.1-201ENST00000362843 134 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 RNU1-23P-201ENST00000363361 144 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 SNORA25.7-201ENST00000364375 127 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 RNU2-55P-201ENST00000411146 174 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 MTCO1P44-201ENST00000441935 243 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 RNU6-579P-201ENST00000516879 102 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 AC090049.2-201ENST00000550377 109 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 uc_338.4-201ENST00000616635 176 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 AC093010.3-201ENST00000570269 15214 ntBASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FNDC3AQ9Y2H6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 AC068647.1-201ENST00000489539 2265 ntBASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 Y_RNA.91-201ENST00000363042 107 ntBASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 RNA5SP139-201ENST00000364340 117 ntBASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 RNU6-153P-201ENST00000364422 104 ntBASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 RNU6-429P-201ENST00000384582 108 ntBASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 Y_RNA.563-201ENST00000384707 108 ntBASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 FO393413.1-201ENST00000402892 195 ntBASIC3.48□□□□□ -1.85
FNDC3AQ9Y2H6 RNU2-70P-201ENST00000410718 179 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms