Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC006111.3-201ENST00000622137 383 ntBASIC3.21□□□□□ -1.9
EBF1Q9UH73 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.21□□□□□ -1.9
EBF1Q9UH73 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
EBF1Q9UH73 AC009487.4-201ENST00000624969 3585 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
EBF1Q9UH73 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
EBF1Q9UH73 U8.7-201ENST00000364940 136 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 RNU6-1323P-201ENST00000384025 107 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 Y_RNA.521-201ENST00000384560 114 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 MT-TT-201ENST00000387460 66 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 SNORA36B-201ENST00000410438 131 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 RN7SKP220-201ENST00000410611 288 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 RNA5SP229-201ENST00000410809 99 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 AC097463.2-201ENST00000421074 142 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 AC092991.1-201ENST00000477176 376 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.2□□□□□ -1.9
EBF1Q9UH73 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
EBF1Q9UH73 RNU5F-4P-201ENST00000516581 114 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 AP001328.1-201ENST00000528550 176 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.2□□□□□ -1.9
EBF1Q9UH73 U7.2-201ENST00000607576 63 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 AC012640.5-201ENST00000623897 319 ntBASIC3.2□□□□□ -1.9
EBF1Q9UH73 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
EBF1Q9UH73 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
EBF1Q9UH73 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
EBF1Q9UH73 RNU6-1056P-201ENST00000383996 107 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 RNU6-44P-201ENST00000384045 107 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 MIR518C-201ENST00000384822 101 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 RNA5SP496-201ENST00000391240 109 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 SNORA75.5-201ENST00000391291 81 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 SNORA79-201ENST00000408376 140 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 HMGN2P9-201ENST00000476875 229 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.19□□□□□ -1.9
EBF1Q9UH73 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 AC068647.2-201ENST00000637380 353 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
EBF1Q9UH73 AC008264.2-201ENST00000610193 3731 ntBASIC3.19□□□□□ -1.9
EBF1Q9UH73 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
EBF1Q9UH73 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
EBF1Q9UH73 CENPCP1-201ENST00000533085 2578 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
EBF1Q9UH73 AL021368.2-201ENST00000606125 5352 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 AC093831.2-201ENST00000624393 3427 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
EBF1Q9UH73 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 RNU6-597P-201ENST00000365620 102 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 SNORA54-201ENST00000384281 123 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 RNU6-768P-201ENST00000384683 107 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 SNORA12-201ENST00000391162 147 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 AC010154.1-201ENST00000425857 269 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 AC117454.1-201ENST00000491120 168 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 RNU1-143P-201ENST00000516296 146 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 RNU6-659P-201ENST00000516454 104 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
EBF1Q9UH73 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EBF1Q9UH73 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EBF1Q9UH73 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.17□□□□□ -1.9
EBF1Q9UH73 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
EBF1Q9UH73 RNU1-105P-201ENST00000363470 161 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 RNU6-1180P-201ENST00000364935 107 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 DYNLT3P1-201ENST00000378574 347 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 MIR1283-1-201ENST00000408494 87 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 EIF4EP4-201ENST00000424916 578 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF1Q9UH73 RNU7-57P-201ENST00000459540 60 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 AC010598.1-201ENST00000510378 103 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 SNORA31.1-201ENST00000515993 133 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 SNORA31.5-201ENST00000516190 133 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 RNU6-561P-201ENST00000516222 102 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 RNU6-1337P-201ENST00000516525 95 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 RNU6-1098P-201ENST00000516772 96 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 SCARNA20.6-201ENST00000517251 106 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.17□□□□□ -1.9
EBF1Q9UH73 MIR3162-201ENST00000581818 82 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.17□□□□□ -1.9
EBF1Q9UH73 AC005972.2-201ENST00000604690 348 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
EBF1Q9UH73 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
EBF1Q9UH73 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
EBF1Q9UH73 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
EBF1Q9UH73 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
EBF1Q9UH73 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.16□□□□□ -1.9
EBF1Q9UH73 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.16□□□□□ -1.9
EBF1Q9UH73 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.16□□□□□ -1.9
EBF1Q9UH73 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EBF1Q9UH73 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EBF1Q9UH73 SNORA27.1-201ENST00000362604 124 ntBASIC3.16□□□□□ -1.9
EBF1Q9UH73 RNU6-674P-201ENST00000363831 107 ntBASIC3.16□□□□□ -1.9
EBF1Q9UH73 SNORA20B-201ENST00000384220 132 ntBASIC3.16□□□□□ -1.9
EBF1Q9UH73 RNU6-301P-201ENST00000384277 107 ntBASIC3.16□□□□□ -1.9
EBF1Q9UH73 AL512604.1-201ENST00000404812 257 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms