Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RN7SKP132-201ENST00000516001 208 ntBASIC5.23□□□□□ -1.57
RNF39Q9H2S5 CYCSP29-201ENST00000533731 318 ntBASIC5.23□□□□□ -1.57
RNF39Q9H2S5 CYP3A52P-201ENST00000563326 91 ntBASIC5.23□□□□□ -1.57
RNF39Q9H2S5 AL121932.1-201ENST00000605542 214 ntBASIC5.23□□□□□ -1.57
RNF39Q9H2S5 U6.109-201ENST00000636749 87 ntBASIC5.23□□□□□ -1.57
RNF39Q9H2S5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
RNF39Q9H2S5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF39Q9H2S5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF39Q9H2S5 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
RNF39Q9H2S5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF39Q9H2S5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF39Q9H2S5 AP005432.1-201ENST00000580891 3485 ntBASIC5.22□□□□□ -1.57
RNF39Q9H2S5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RNF39Q9H2S5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
RNF39Q9H2S5 RNA5SP332-201ENST00000391063 115 ntBASIC5.22□□□□□ -1.57
RNF39Q9H2S5 HMGN2P39-201ENST00000398005 273 ntBASIC5.22□□□□□ -1.57
RNF39Q9H2S5 RN7SL346P-201ENST00000491561 294 ntBASIC5.22□□□□□ -1.57
RNF39Q9H2S5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC5.22□□□□□ -1.57
RNF39Q9H2S5 MIR5699-201ENST00000578903 90 ntBASIC5.22□□□□□ -1.57
RNF39Q9H2S5 MIR4697-201ENST00000582977 78 ntBASIC5.22□□□□□ -1.57
RNF39Q9H2S5 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RNF39Q9H2S5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.22□□□□□ -1.57
RNF39Q9H2S5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RNF39Q9H2S5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RNF39Q9H2S5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF39Q9H2S5 Y_RNA.119-201ENST00000363301 96 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 RNU6-198P-201ENST00000384258 104 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF39Q9H2S5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RNF39Q9H2S5 RN7SL690P-201ENST00000582087 240 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 UBL5P2-201ENST00000583788 219 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 MIR378J-201ENST00000611988 109 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 U4.3-201ENST00000621047 82 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 MIR7641-1-201ENST00000627518 61 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF39Q9H2S5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF39Q9H2S5 AC092376.2-201ENST00000622621 4116 ntBASIC5.21□□□□□ -1.58
RNF39Q9H2S5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RNF39Q9H2S5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
RNF39Q9H2S5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 RNU6-520P-201ENST00000384717 104 ntBASIC5.2□□□□□ -1.58
RNF39Q9H2S5 RNU1-82P-201ENST00000390851 165 ntBASIC5.2□□□□□ -1.58
RNF39Q9H2S5 AC244098.3-201ENST00000424803 96 ntBASIC5.2□□□□□ -1.58
RNF39Q9H2S5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 SNORA74C-1-201ENST00000580726 201 ntBASIC5.2□□□□□ -1.58
RNF39Q9H2S5 DLEU2_3.1-201ENST00000620005 73 ntBASIC5.2□□□□□ -1.58
RNF39Q9H2S5 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 Z95114.1-201ENST00000624264 14574 ntBASIC5.2□□□□□ -1.58
RNF39Q9H2S5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF39Q9H2S5 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RNA5SP322-201ENST00000363617 119 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RNU6-949P-201ENST00000384040 107 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RNU6-994P-201ENST00000410507 111 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 HMGN2P21-201ENST00000447764 270 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 SNORD123-201ENST00000459473 70 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RNU7-106P-201ENST00000459514 67 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RN7SL517P-201ENST00000462240 305 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 AC091167.1-201ENST00000492017 396 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RN7SL636P-201ENST00000497504 294 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 RNA5SP196-201ENST00000625967 102 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 MIR4773-1-201ENST00000637203 78 ntBASIC5.19□□□□□ -1.58
RNF39Q9H2S5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF39Q9H2S5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 AC112198.2-201ENST00000426589 6996 ntBASIC5.18□□□□□ -1.58
RNF39Q9H2S5 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 SNORD60.1-201ENST00000362451 73 ntBASIC5.18□□□□□ -1.58
RNF39Q9H2S5 SNORA70F-201ENST00000384142 135 ntBASIC5.18□□□□□ -1.58
RNF39Q9H2S5 SNORA67.4-201ENST00000384688 142 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 477.4 ms