Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 ARSFP1-201ENST00000398758 477 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 AL138878.1-201ENST00000405131 347 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR1266-201ENST00000408125 84 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR1257-201ENST00000408490 117 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SKP213-201ENST00000410746 298 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU7-185P-201ENST00000459215 60 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SL817P-201ENST00000480777 288 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 AC006539.1-201ENST00000481419 501 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 AC015524.1-201ENST00000491585 472 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 RNA5SP75-201ENST00000516841 111 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 AC010329.1-201ENST00000593903 8328 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6736-201ENST00000616799 59 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 AC034229.5-201ENST00000624258 185 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 AC083843.2-201ENST00000568248 6253 ntBASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
KRTAP3-3Q9BYR6 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 CR1-203ENST00000367051 7469 ntTSL 5 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 SNORA21-201ENST00000362423 132 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SKP185-201ENST00000362813 326 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 RNA5SP485-201ENST00000365053 119 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 SNORD116-16-201ENST00000384533 92 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 RNA5SP156-201ENST00000410250 110 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 BX323845.1-201ENST00000432417 179 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 AC244505.6-201ENST00000452829 130 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 SNORA74.1-201ENST00000516320 180 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 IGLV3-24-201ENST00000517477 197 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR548AG2-201ENST00000581228 64 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR3192-201ENST00000584920 77 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 AC008521.2-201ENST00000591021 259 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
KRTAP3-3Q9BYR6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 AC083899.1-201ENST00000454465 3819 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU6-822P-201ENST00000362707 106 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU6-112P-201ENST00000363599 104 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 Y_RNA.325-201ENST00000365171 122 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR597-201ENST00000384968 97 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR431-201ENST00000385266 114 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 SNORD94-201ENST00000386037 137 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU11-3P-201ENST00000391111 133 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 FTLP8-201ENST00000446770 267 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SL197P-201ENST00000466981 299 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 RN7SKP46-201ENST00000515942 234 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 RNU6-711P-201ENST00000517255 106 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR4701-201ENST00000583094 63 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 MIR6070-201ENST00000613967 103 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
KRTAP3-3Q9BYR6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
KRTAP3-3Q9BYR6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms