Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RPS29P4-201ENST00000414733 161 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 AL135786.1-201ENST00000415892 214 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 AC009969.1-201ENST00000438726 172 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 AC016925.1-201ENST00000458303 298 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 SNORD65B-201ENST00000459126 73 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 AC021205.2-201ENST00000480069 347 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 SNORA74D-201ENST00000516404 141 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 SNORA70.19-201ENST00000516717 90 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 RNU2-56P-201ENST00000516826 190 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 AC006435.5-201ENST00000624486 112 ntBASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM56Q9BRZ2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 MAPK10-362ENST00000641864 4484 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 SNORD45.3-201ENST00000363836 72 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-44P-201ENST00000384045 107 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 MIR95-201ENST00000385072 81 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-588P-201ENST00000410281 105 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-57P-201ENST00000411348 103 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 SNORD105B-201ENST00000458770 79 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 RPS29P12-201ENST00000460178 152 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 RPL23AP67-201ENST00000465341 474 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 RNA5SP20-201ENST00000515976 84 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-948P-201ENST00000516374 107 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 SCARNA13-201ENST00000516672 275 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 SNORA70.24-201ENST00000517233 118 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 AC090142.3-201ENST00000519012 385 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 MIR5047-201ENST00000579212 100 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 MIR3922-201ENST00000585192 84 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 MIR8058-201ENST00000615737 89 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 MIR7975-201ENST00000619350 68 ntBASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM56Q9BRZ2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-674P-201ENST00000363831 107 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-597P-201ENST00000365620 102 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-1056P-201ENST00000383996 107 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 SNORD14D-201ENST00000384390 87 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 SNORD17-201ENST00000390930 237 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 Y_RNA.622-201ENST00000411091 108 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RN7SKP101-201ENST00000411376 320 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 AC008134.1-201ENST00000420943 193 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 CYCSP4-201ENST00000429682 331 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RN7SL293P-201ENST00000481765 281 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 MIR449C-201ENST00000516047 92 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-659P-201ENST00000516454 104 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM56Q9BRZ2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 AC073346.2-201ENST00000624724 2058 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 AL356292.1-201ENST00000283110 373 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RNU4-35P-201ENST00000362588 141 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RNU4-41P-201ENST00000364426 143 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-1080P-201ENST00000383982 107 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-1235P-201ENST00000384559 107 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RNU2-55P-201ENST00000411146 174 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 AC245047.4-201ENST00000433189 144 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 AL353705.1-201ENST00000433468 480 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-498P-201ENST00000459468 107 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 MIR378D2-201ENST00000580636 98 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 MIR3199-1-201ENST00000582434 88 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 MIR3616-201ENST00000584070 92 ntBASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM56Q9BRZ2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 RNU4-13P-201ENST00000364019 141 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-805P-201ENST00000365643 106 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 Y_RNA.563-201ENST00000384707 108 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 MIR1278-201ENST00000408753 81 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AL161788.1-201ENST00000441805 169 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 RPS27P29-201ENST00000463110 252 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AC107934.2-201ENST00000518653 310 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AC090049.2-201ENST00000550377 109 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AL356280.1-201ENST00000603614 379 ntBASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM56Q9BRZ2 AL356274.2-201ENST00000624379 3752 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 Y_RNA.251-201ENST00000364551 99 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-915P-201ENST00000364943 103 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 RNU6-546P-201ENST00000383991 107 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 Y_RNA.584-201ENST00000391090 114 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 Y_RNA.587-201ENST00000391210 103 ntBASIC3.41□□□□□ -1.86
TRIM56Q9BRZ2 FO393413.1-201ENST00000402892 195 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms