Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.04□□□□□ -1.92
NUP43Q8NFH3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.04□□□□□ -1.92
NUP43Q8NFH3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP43Q8NFH3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
NUP43Q8NFH3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP43Q8NFH3 AC091564.4-201ENST00000533934 2194 ntBASIC3.04□□□□□ -1.92
NUP43Q8NFH3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NUP43Q8NFH3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 SNORD45.3-201ENST00000363836 72 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RNU1-33P-201ENST00000364249 162 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 Y_RNA.251-201ENST00000364551 99 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 SNORD31B-201ENST00000364977 69 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RNU6-80P-201ENST00000384195 107 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RPS27P1-201ENST00000450552 247 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RN7SL601P-201ENST00000471221 293 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RNA5SP217-201ENST00000515959 91 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RNU6-63P-201ENST00000516690 95 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 RNU7-116P-201ENST00000516940 62 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 AC023043.3-201ENST00000593113 385 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 AP001340.1-201ENST00000624405 217 ntBASIC3.03□□□□□ -1.92
NUP43Q8NFH3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP43Q8NFH3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AC110774.1-201ENST00000623567 2018 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 CENPCP1-201ENST00000533085 2578 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 RNA5SP267-201ENST00000364893 126 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 Y_RNA.521-201ENST00000384560 114 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 RNU6-588P-201ENST00000410281 105 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 Y_RNA.622-201ENST00000411091 108 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 RN7SKP101-201ENST00000411376 320 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 SNRPGP8-201ENST00000454064 226 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AC016925.1-201ENST00000458303 298 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 RNU6-437P-201ENST00000459408 95 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 RNA5SP20-201ENST00000515976 84 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 Y_RNA.686-201ENST00000516548 134 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AC027419.1-201ENST00000522976 328 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AC018630.3-201ENST00000542637 96 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 MIR3186-201ENST00000577404 85 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AL021707.8-201ENST00000609428 183 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AC110079.1-202ENST00000635213 138 ntBASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.02□□□□□ -1.93
NUP43Q8NFH3 RNU6-674P-201ENST00000363831 107 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 RNU6-1180P-201ENST00000364935 107 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 RNU6-117P-201ENST00000365415 107 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP43Q8NFH3 AC016909.1-201ENST00000415916 166 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 AC010531.2-201ENST00000465012 153 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 RN7SL807P-201ENST00000470923 297 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 RPL23AP54-201ENST00000495129 419 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 AC025647.1-201ENST00000517879 253 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.01□□□□□ -1.93
NUP43Q8NFH3 AL031274.2-201ENST00000599419 203 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP43Q8NFH3 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.01□□□□□ -1.93
NUP43Q8NFH3 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 UCA1.1-201ENST00000620952 75 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NUP43Q8NFH3 MIR3651-201ENST00000630427 90 ntBASIC3.01□□□□□ -1.93
NUP43Q8NFH3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NUP43Q8NFH3 RNU6-805P-201ENST00000365643 106 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 CD24P4-201ENST00000382840 243 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 RNU6-44P-201ENST00000384045 107 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUP43Q8NFH3 SNORA75.5-201ENST00000391291 81 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 RNU6-1328P-201ENST00000410938 106 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUP43Q8NFH3 AL035461.1-201ENST00000421490 332 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3□□□□□ -1.93
NUP43Q8NFH3 RNU4-57P-201ENST00000515980 135 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 RNU6-659P-201ENST00000516454 104 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 RN7SKP57-201ENST00000517248 293 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3□□□□□ -1.93
NUP43Q8NFH3 AC120024.3-201ENST00000603167 156 ntBASIC3□□□□□ -1.93
NUP43Q8NFH3 AC011603.4-201ENST00000611325 277 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms