Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SNORD37.2-201ENST00000391075 66 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 MIR320B2-201ENST00000408479 138 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 AC009414.1-201ENST00000427200 443 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 AL121914.1-201ENST00000450188 156 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 AL441985.1-201ENST00000457727 251 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 MIR4435-1-201ENST00000582552 80 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 AL391903.3-201ENST00000612158 163 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNKSR3Q6P9H4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CNKSR3Q6P9H4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-529P-201ENST00000363383 104 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-643P-201ENST00000384018 107 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 MIR15B-201ENST00000385045 98 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 AL133475.1-201ENST00000404414 305 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 RNU7-141P-201ENST00000459304 62 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-344P-201ENST00000516635 111 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 AC091152.3-201ENST00000604227 325 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 AL034555.1-201ENST00000604816 211 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 AP001340.1-201ENST00000624405 217 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.21□□□□□ -1.9
CNKSR3Q6P9H4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 Y_RNA.229-201ENST00000364347 113 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 Y_RNA.341-201ENST00000365341 102 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 SNORA9.2-201ENST00000365361 133 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 Y_RNA.361-201ENST00000365515 120 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-588P-201ENST00000410281 105 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-855P-201ENST00000410395 104 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 AC027124.2-201ENST00000428249 105 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 AC107626.1-201ENST00000471084 183 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 SNORD11B-201ENST00000607707 90 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 MIR6129-201ENST00000616087 109 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 U6.115-201ENST00000636045 103 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 AC068205.3-201ENST00000636385 468 ntBASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.2□□□□□ -1.9
CNKSR3Q6P9H4 AP003122.5-201ENST00000527668 3766 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 RNU1-75P-201ENST00000347264 129 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 Y_RNA.251-201ENST00000364551 99 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 Y_RNA.456-201ENST00000384232 111 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 MIR147B-201ENST00000390185 80 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AL139095.1-201ENST00000404326 391 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AL606845.1-201ENST00000404881 255 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-710P-201ENST00000410424 105 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AC004386.2-201ENST00000441858 148 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 RNU2-56P-201ENST00000516826 190 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 RNU1-117P-201ENST00000517041 158 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AC008739.2-201ENST00000597006 317 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 MIR6715A-201ENST00000615929 79 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AC005562.2-201ENST00000618264 111 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 AC002064.3-201ENST00000623448 346 ntBASIC3.19□□□□□ -1.9
CNKSR3Q6P9H4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 RNU4-15P-201ENST00000362613 141 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 Y_RNA.43-201ENST00000362670 111 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 SNORA67.2-201ENST00000384300 149 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 RNU6-1064P-201ENST00000410626 104 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 CYCTP-201ENST00000504253 315 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 AP001328.1-201ENST00000528550 176 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 AC127455.1-201ENST00000565496 145 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 MIR3646-201ENST00000578301 84 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
CNKSR3Q6P9H4 MIR6844-201ENST00000637122 62 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms