Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC058791.1-201ENST00000608412 3198 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNY1P11-201ENST00000363759 113 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNA5SP139-201ENST00000364340 117 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 MIR591-201ENST00000385290 95 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 U6atac.2-201ENST00000408644 118 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-588P-201ENST00000410281 105 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 ARF4P2-201ENST00000430209 526 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 MICF-203ENST00000432679 129 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC008267.6-201ENST00000441664 139 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC115115.1-201ENST00000449927 248 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-498P-201ENST00000459468 107 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC010531.2-201ENST00000465012 153 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC091153.1-201ENST00000466297 402 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-1234P-201ENST00000516877 103 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU7-116P-201ENST00000516940 62 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC015720.1-201ENST00000565251 277 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 MIR5680-201ENST00000577577 84 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HLA-DQA1Q5Y7H0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 Y_RNA.71-201ENST00000362892 104 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 SNORD45.3-201ENST00000363836 72 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 SNORD6-201ENST00000365444 73 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-546P-201ENST00000383991 107 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-460P-201ENST00000391158 108 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU4-47P-201ENST00000410876 114 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU2-32P-201ENST00000411193 191 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RPL32P35-201ENST00000415214 394 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 AL353705.1-201ENST00000433468 480 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC092991.1-201ENST00000477176 376 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RPS27P22-201ENST00000478056 241 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 PHBP14-201ENST00000512887 367 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNA5SP490-201ENST00000517141 136 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 MIR3186-201ENST00000577404 85 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC105245.1-201ENST00000581934 244 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC093732.2-201ENST00000607950 274 ntBASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DQA1Q5Y7H0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU4-13P-201ENST00000364019 141 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU4-41P-201ENST00000364426 143 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNU6-117P-201ENST00000365415 107 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 RNY3P5-201ENST00000384127 102 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 Z82209.1-201ENST00000422141 2135 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 RN7SL863P-201ENST00000462370 296 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC007179.3-201ENST00000604976 235 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 AC090115.4-201ENST00000609970 188 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 U6.98-201ENST00000637157 84 ntBASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1Q5Y7H0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 Y_RNA.81-201ENST00000362997 102 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 Y_RNA.127-201ENST00000363386 109 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU4-43P-201ENST00000410628 137 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNA5SP229-201ENST00000410809 99 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC008134.1-201ENST00000420943 193 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 RPS27P1-201ENST00000450552 247 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNA5SP217-201ENST00000515959 91 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU6-1333P-201ENST00000516162 93 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 SNORA64.4-201ENST00000516632 81 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC074050.1-201ENST00000563247 211 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR3646-201ENST00000578301 84 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL929325.1-201ENST00000603096 117 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 uc_338.25-201ENST00000613756 156 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 XIST_intron.1-201ENST00000619444 68 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR5739-201ENST00000619803 80 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC073476.4-201ENST00000628409 72 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 MIR7157-201ENST00000635801 60 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 CENPCP1-201ENST00000533085 2578 ntBASIC2.96□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC080128.1-201ENST00000474389 1917 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU1-23P-201ENST00000363361 144 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNU6-674P-201ENST00000363831 107 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 RNA5SP205-201ENST00000364653 136 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 Y_RNA.393-201ENST00000383936 102 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 FO393413.1-201ENST00000402892 195 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 AL512604.1-201ENST00000404812 257 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC009969.1-201ENST00000438726 172 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 BX510359.1-201ENST00000456973 237 ntBASIC2.95□□□□□ -1.94
HLA-DQA1Q5Y7H0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms