Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.58□□□□□ -1.84
TTC39BQ5VTQ0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.58□□□□□ -1.84
TTC39BQ5VTQ0 AC015720.1-201ENST00000565251 277 ntBASIC3.58□□□□□ -1.84
TTC39BQ5VTQ0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.58□□□□□ -1.84
TTC39BQ5VTQ0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TTC39BQ5VTQ0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TTC39BQ5VTQ0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 RNU4-35P-201ENST00000362588 141 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 Y_RNA.294-201ENST00000364916 102 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-117P-201ENST00000365415 107 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-1056P-201ENST00000383996 107 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-136P-201ENST00000384663 107 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 SNORA11.1-201ENST00000408133 129 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 AC016909.1-201ENST00000415916 166 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 AC016925.1-201ENST00000458303 298 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 FCF1P8-201ENST00000510322 597 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-586P-201ENST00000517265 104 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 AC013412.1-201ENST00000610687 192 ntBASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TTC39BQ5VTQ0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 SNORA63.1-201ENST00000362493 131 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 SNORD46.1-201ENST00000364139 104 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 RNA5SP387-201ENST00000364226 106 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 RNU1-33P-201ENST00000364249 162 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 SNORD17-201ENST00000390930 237 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 RN7SKP220-201ENST00000410611 288 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-197P-201ENST00000516680 100 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 AC090142.3-201ENST00000519012 385 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 AL049861.1-201ENST00000603130 150 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
TTC39BQ5VTQ0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-978P-201ENST00000364371 103 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-484P-201ENST00000384016 107 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 Y_RNA.584-201ENST00000391090 114 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 AC245047.4-201ENST00000433189 144 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 PRSS3P4-201ENST00000453323 162 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 RPL23AP67-201ENST00000465341 474 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 RN7SKP179-201ENST00000516126 217 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 AL929325.1-201ENST00000603096 117 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 MIR7975-201ENST00000619350 68 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 AC006435.5-201ENST00000624486 112 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TTC39BQ5VTQ0 RNU4-13P-201ENST00000364019 141 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-429P-201ENST00000384582 108 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RNU2-55P-201ENST00000411146 174 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC093578.1-201ENST00000415219 368 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AL513477.1-202ENST00000417061 214 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RPL30P4-201ENST00000429309 333 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-498P-201ENST00000459468 107 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC080013.2-201ENST00000460866 323 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RPS27P22-201ENST00000478056 241 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-965P-201ENST00000516721 96 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC018630.3-201ENST00000542637 96 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 AC090049.2-201ENST00000550377 109 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 MIR1248-201ENST00000629190 106 ntBASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TTC39BQ5VTQ0 MIR208A-201ENST00000362287 71 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-235P-201ENST00000362644 107 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 Y_RNA.432-201ENST00000384087 111 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 SNORA72-201ENST00000384339 132 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 MIR34B-201ENST00000385076 84 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 RNU6-1064P-201ENST00000410626 104 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 Z96811.1-201ENST00000445880 108 ntBASIC3.53□□□□□ -1.84
TTC39BQ5VTQ0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms