Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1I3Q14994 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1I3Q14994 AL121890.1-201ENST00000435457 205 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 RNU7-197P-201ENST00000458836 62 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1I3Q14994 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.09□□□□□ -1.91
NR1I3Q14994 RNU6-1337P-201ENST00000516525 95 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 AC027419.1-201ENST00000522976 328 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.09□□□□□ -1.91
NR1I3Q14994 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 LARP7P3-201ENST00000579888 337 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 AC008739.2-201ENST00000597006 317 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 AL031274.2-201ENST00000599419 203 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1I3Q14994 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.09□□□□□ -1.91
NR1I3Q14994 MIR548AY-201ENST00000617669 107 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 AC012640.5-201ENST00000623897 319 ntBASIC3.09□□□□□ -1.91
NR1I3Q14994 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NR1I3Q14994 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.92
NR1I3Q14994 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.92
NR1I3Q14994 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1I3Q14994 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1I3Q14994 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1I3Q14994 RNU6-215P-201ENST00000365169 102 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 SNORD116-14-201ENST00000383894 92 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 SNORD116-17-201ENST00000383929 92 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 SNORA20B-201ENST00000384220 132 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 SNORD116-15-201ENST00000384445 92 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 RNU6-768P-201ENST00000384683 107 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 SNORD116-19-201ENST00000384729 92 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 MIR518C-201ENST00000384822 101 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 SNORA36B-201ENST00000410438 131 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1I3Q14994 SNORA84-201ENST00000459229 133 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 RNU7-14P-201ENST00000459331 62 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 RNU7-57P-201ENST00000459540 60 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.08□□□□□ -1.92
NR1I3Q14994 AC092991.1-201ENST00000477176 376 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 RNU7-115P-201ENST00000516433 55 ntBASIC3.08□□□□□ -1.92
NR1I3Q14994 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1I3Q14994 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1I3Q14994 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.08□□□□□ -1.92
NR1I3Q14994 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
NR1I3Q14994 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NR1I3Q14994 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.08□□□□□ -1.92
NR1I3Q14994 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1I3Q14994 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR1I3Q14994 RNU6-728P-201ENST00000365375 104 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 RNU6-144P-201ENST00000383951 107 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 MIR767-201ENST00000390228 109 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 RNU6-1228P-201ENST00000391014 107 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 RNU6-588P-201ENST00000410281 105 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 AL358232.1-201ENST00000448030 501 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 RPL23AP7-203ENST00000449021 469 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 Y_RNA.686-201ENST00000516548 134 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.07□□□□□ -1.92
NR1I3Q14994 YPEL5P2-201ENST00000605553 359 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 AC011603.4-201ENST00000611325 277 ntBASIC3.07□□□□□ -1.92
NR1I3Q14994 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.07□□□□□ -1.92
NR1I3Q14994 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NR1I3Q14994 MIR26A1-201ENST00000362205 77 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 Y_RNA.273-201ENST00000364703 102 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NR1I3Q14994 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NR1I3Q14994 Y_RNA.521-201ENST00000384560 114 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
NR1I3Q14994 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
NR1I3Q14994 MIR873-201ENST00000401120 77 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 MIR1283-1-201ENST00000408494 87 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 Y_RNA.622-201ENST00000411091 108 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 AC009414.1-201ENST00000427200 443 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 RPL39P40-201ENST00000445481 146 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 AC016717.1-201ENST00000448918 286 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NR1I3Q14994 RN7SL601P-201ENST00000471221 293 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 AC091826.1-201ENST00000514065 313 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 SNORA31.1-201ENST00000515993 133 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 SNORA31.5-201ENST00000516190 133 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 RNU6-63P-201ENST00000516690 95 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.06□□□□□ -1.92
NR1I3Q14994 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
NR1I3Q14994 MIR4765-201ENST00000585007 77 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 AC019176.2-201ENST00000611579 315 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 MIR6844-201ENST00000637122 62 ntBASIC3.06□□□□□ -1.92
NR1I3Q14994 AL356292.1-201ENST00000283110 373 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 RNU6-1180P-201ENST00000364935 107 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 MIR539-201ENST00000365690 78 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 RNU6-851P-201ENST00000384565 107 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
NR1I3Q14994 RN7SL807P-201ENST00000470923 297 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 RNU2-56P-201ENST00000516826 190 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 MIR5688-201ENST00000580619 83 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 ZNF861P-201ENST00000588126 639 ntBASIC3.05□□□□□ -1.92
NR1I3Q14994 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms