Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC244205.2-202ENST00000635781 342 ntBASIC3.65□□□□□ -1.83
RNF144AP50876 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNF144AP50876 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF144AP50876 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF144AP50876 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNF144AP50876 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
RNF144AP50876 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF144AP50876 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF144AP50876 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RNF144AP50876 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF144AP50876 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RNF144AP50876 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF144AP50876 SNORA60-201ENST00000362396 134 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 Y_RNA.78-201ENST00000362970 110 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 RNU6-486P-201ENST00000363116 107 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 RNU1-105P-201ENST00000363470 161 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 RNU6-690P-201ENST00000365242 106 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 RNA5SP283-201ENST00000365604 119 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 MIR548A2-201ENST00000384956 97 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 RNU6-592P-201ENST00000411333 103 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 AC092017.2-201ENST00000427600 362 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 AC025750.2-201ENST00000442609 450 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 RAC1P2-201ENST00000511164 579 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF144AP50876 AC073413.2-201ENST00000604332 360 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF144AP50876 MALAT1.1-201ENST00000618249 95 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 MIR6500-201ENST00000622700 86 ntBASIC3.64□□□□□ -1.83
RNF144AP50876 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RNF144AP50876 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF144AP50876 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RNF144AP50876 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF144AP50876 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF144AP50876 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF144AP50876 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF144AP50876 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF144AP50876 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF144AP50876 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
RNF144AP50876 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF144AP50876 Y_RNA.253-201ENST00000364562 112 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 RNU1-13P-201ENST00000384499 162 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 MIR1251-201ENST00000408552 70 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 AL117339.2-201ENST00000430475 180 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 AL500522.2-201ENST00000448562 343 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 AL031183.1-201ENST00000457667 207 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 RNU6-830P-201ENST00000516353 107 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 RNU6-158P-201ENST00000517104 100 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 RNA5SP490-201ENST00000517141 136 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 MIR5197-201ENST00000583721 112 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 MIR1248-201ENST00000629190 106 ntBASIC3.63□□□□□ -1.83
RNF144AP50876 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RNF144AP50876 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RNF144AP50876 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF144AP50876 Y_RNA.242-201ENST00000364473 110 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 RNU6-1186P-201ENST00000410429 97 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 AC109327.2-201ENST00000448339 378 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF144AP50876 SNORA4.4-201ENST00000515921 135 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 AC022695.1-201ENST00000522089 237 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 AC084364.2-201ENST00000546924 395 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF144AP50876 ZYXP1-201ENST00000617638 118 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 CR392039.5-201ENST00000623201 510 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 MIR376A2-201ENST00000636782 80 ntBASIC3.62□□□□□ -1.83
RNF144AP50876 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF144AP50876 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF144AP50876 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF144AP50876 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF144AP50876 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF144AP50876 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF144AP50876 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF144AP50876 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RNF144AP50876 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF144AP50876 MIR518F-201ENST00000384973 87 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 RN7SKP156-201ENST00000410308 342 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 RPS15AP28-201ENST00000435088 386 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 AC107297.1-201ENST00000459991 176 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 RNA5SP208-201ENST00000516156 78 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 RNU6-1291P-201ENST00000516591 104 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 MIR2116-201ENST00000517221 80 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 MIR6875-201ENST00000617506 72 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF144AP50876 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF144AP50876 AC093908.1-201ENST00000623125 8092 ntBASIC3.61□□□□□ -1.83
RNF144AP50876 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF144AP50876 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
RNF144AP50876 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF144AP50876 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF144AP50876 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF144AP50876 MIR494-201ENST00000349529 81 ntBASIC3.6□□□□□ -1.83
RNF144AP50876 SNORA63D-201ENST00000364359 132 ntBASIC3.6□□□□□ -1.83
RNF144AP50876 Y_RNA.265-201ENST00000364677 108 ntBASIC3.6□□□□□ -1.83
RNF144AP50876 RNU6-1134P-201ENST00000365156 101 ntBASIC3.6□□□□□ -1.83
RNF144AP50876 SNORA2.2-201ENST00000365473 135 ntBASIC3.6□□□□□ -1.83
RNF144AP50876 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RNF144AP50876 AC004975.1-201ENST00000428733 208 ntBASIC3.6□□□□□ -1.83
RNF144AP50876 HMGN2P34-201ENST00000437647 269 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms