Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GDNFP39905 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.05□□□□□ -1.92
GDNFP39905 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GDNFP39905 RNA5SP383-201ENST00000362934 120 ntBASIC3.05□□□□□ -1.92
GDNFP39905 RNU6-944P-201ENST00000364023 107 ntBASIC3.05□□□□□ -1.92
GDNFP39905 RNU6-234P-201ENST00000365229 104 ntBASIC3.05□□□□□ -1.92
GDNFP39905 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
GDNFP39905 RNA5SP354-201ENST00000391247 136 ntBASIC3.05□□□□□ -1.92
GDNFP39905 SNORA48.8-201ENST00000391324 134 ntBASIC3.05□□□□□ -1.92
GDNFP39905 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.05□□□□□ -1.92
GDNFP39905 AC245102.2-201ENST00000448956 180 ntBASIC3.05□□□□□ -1.92
GDNFP39905 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
GDNFP39905 AC109329.2-201ENST00000519658 482 ntBASIC3.05□□□□□ -1.92
GDNFP39905 AC068657.1-201ENST00000520807 306 ntBASIC3.05□□□□□ -1.92
GDNFP39905 AC104027.1-201ENST00000521887 300 ntBASIC3.05□□□□□ -1.92
GDNFP39905 IGKV1-22-201ENST00000524313 326 ntBASIC3.05□□□□□ -1.92
GDNFP39905 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
GDNFP39905 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.05□□□□□ -1.92
GDNFP39905 MIR2681-201ENST00000581814 105 ntBASIC3.05□□□□□ -1.92
GDNFP39905 AC013412.1-201ENST00000610687 192 ntBASIC3.05□□□□□ -1.92
GDNFP39905 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
GDNFP39905 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
GDNFP39905 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
GDNFP39905 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
GDNFP39905 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
GDNFP39905 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GDNFP39905 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
GDNFP39905 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.04□□□□□ -1.92
GDNFP39905 SNORD56.3-201ENST00000363507 71 ntBASIC3.04□□□□□ -1.92
GDNFP39905 RNU6-1209P-201ENST00000363655 107 ntBASIC3.04□□□□□ -1.92
GDNFP39905 Y_RNA.796-201ENST00000364268 102 ntBASIC3.04□□□□□ -1.92
GDNFP39905 Y_RNA.799-201ENST00000364992 102 ntBASIC3.04□□□□□ -1.92
GDNFP39905 RNU6-1274P-201ENST00000384557 107 ntBASIC3.04□□□□□ -1.92
GDNFP39905 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.04□□□□□ -1.92
GDNFP39905 RPS4XP11-201ENST00000446897 772 ntBASIC3.04□□□□□ -1.92
GDNFP39905 AL133162.1-201ENST00000463228 453 ntBASIC3.04□□□□□ -1.92
GDNFP39905 SNORA31.21-201ENST00000517180 77 ntBASIC3.04□□□□□ -1.92
GDNFP39905 RNU1-104P-201ENST00000517280 175 ntBASIC3.04□□□□□ -1.92
GDNFP39905 MIR3117-201ENST00000584034 78 ntBASIC3.04□□□□□ -1.92
GDNFP39905 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.04□□□□□ -1.92
GDNFP39905 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
GDNFP39905 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.04□□□□□ -1.92
GDNFP39905 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
GDNFP39905 MAPK10-362ENST00000641864 4484 ntBASIC3.03□□□□□ -1.92
GDNFP39905 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
GDNFP39905 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GDNFP39905 Y_RNA.111-201ENST00000363248 100 ntBASIC3.03□□□□□ -1.92
GDNFP39905 Y_RNA.486-201ENST00000384398 107 ntBASIC3.03□□□□□ -1.92
GDNFP39905 RNU6-106P-201ENST00000384405 107 ntBASIC3.03□□□□□ -1.92
GDNFP39905 MIR891A-201ENST00000401237 79 ntBASIC3.03□□□□□ -1.92
GDNFP39905 MIR1263-201ENST00000408324 86 ntBASIC3.03□□□□□ -1.92
GDNFP39905 RNA5SP127-201ENST00000411051 133 ntBASIC3.03□□□□□ -1.92
GDNFP39905 RPL30P4-201ENST00000429309 333 ntBASIC3.03□□□□□ -1.92
GDNFP39905 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.03□□□□□ -1.92
GDNFP39905 RNU6-948P-201ENST00000516374 107 ntBASIC3.03□□□□□ -1.92
GDNFP39905 RNU7-149P-201ENST00000516739 59 ntBASIC3.03□□□□□ -1.92
GDNFP39905 AC103810.1-201ENST00000579873 453 ntBASIC3.03□□□□□ -1.92
GDNFP39905 AC106754.2-201ENST00000623006 233 ntBASIC3.03□□□□□ -1.92
GDNFP39905 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GDNFP39905 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
GDNFP39905 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
GDNFP39905 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GDNFP39905 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
GDNFP39905 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
GDNFP39905 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
GDNFP39905 SNORD31B-201ENST00000364977 69 ntBASIC3.02□□□□□ -1.93
GDNFP39905 MIR624-201ENST00000385217 97 ntBASIC3.02□□□□□ -1.93
GDNFP39905 SNORA26-201ENST00000391286 122 ntBASIC3.02□□□□□ -1.93
GDNFP39905 RN7SKP284-201ENST00000411002 343 ntBASIC3.02□□□□□ -1.93
GDNFP39905 AC016909.1-201ENST00000415916 166 ntBASIC3.02□□□□□ -1.93
GDNFP39905 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.02□□□□□ -1.93
GDNFP39905 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.02□□□□□ -1.93
GDNFP39905 AL021397.1-201ENST00000451806 248 ntBASIC3.02□□□□□ -1.93
GDNFP39905 AL031183.1-201ENST00000457667 207 ntBASIC3.02□□□□□ -1.93
GDNFP39905 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.02□□□□□ -1.93
GDNFP39905 AC007751.1-201ENST00000529260 376 ntBASIC3.02□□□□□ -1.93
GDNFP39905 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.02□□□□□ -1.93
GDNFP39905 MIR4765-201ENST00000585007 77 ntBASIC3.02□□□□□ -1.93
GDNFP39905 AC006435.5-201ENST00000624486 112 ntBASIC3.02□□□□□ -1.93
GDNFP39905 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.02□□□□□ -1.93
GDNFP39905 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GDNFP39905 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
GDNFP39905 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.01□□□□□ -1.93
GDNFP39905 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
GDNFP39905 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
GDNFP39905 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
GDNFP39905 RNU6-1240P-201ENST00000365155 104 ntBASIC3.01□□□□□ -1.93
GDNFP39905 MIR562-201ENST00000384894 95 ntBASIC3.01□□□□□ -1.93
GDNFP39905 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.01□□□□□ -1.93
GDNFP39905 RN7SKP202-201ENST00000410439 330 ntBASIC3.01□□□□□ -1.93
GDNFP39905 RNU6-554P-201ENST00000410466 106 ntBASIC3.01□□□□□ -1.93
GDNFP39905 RN7SKP27-201ENST00000410684 333 ntBASIC3.01□□□□□ -1.93
GDNFP39905 TRIAP1P1-201ENST00000427062 225 ntBASIC3.01□□□□□ -1.93
GDNFP39905 RPL23AP67-201ENST00000465341 474 ntBASIC3.01□□□□□ -1.93
GDNFP39905 RN7SL594P-201ENST00000470590 287 ntBASIC3.01□□□□□ -1.93
GDNFP39905 RN7SL807P-201ENST00000470923 297 ntBASIC3.01□□□□□ -1.93
GDNFP39905 OR9P1P-201ENST00000496431 281 ntBASIC3.01□□□□□ -1.93
GDNFP39905 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.01□□□□□ -1.93
GDNFP39905 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.01□□□□□ -1.93
GDNFP39905 AC011604.1-201ENST00000545978 196 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms