Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SNORA9-201ENST00000384215 133 ntBASIC3.58□□□□□ -1.84
RARAP10276 RNU6-1077P-201ENST00000410506 102 ntBASIC3.58□□□□□ -1.84
RARAP10276 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
RARAP10276 RPL39P40-201ENST00000445481 146 ntBASIC3.58□□□□□ -1.84
RARAP10276 RNU6-948P-201ENST00000516374 107 ntBASIC3.58□□□□□ -1.84
RARAP10276 RNU6-1061P-201ENST00000516530 99 ntBASIC3.58□□□□□ -1.84
RARAP10276 RNU2-60P-201ENST00000517290 128 ntBASIC3.58□□□□□ -1.84
RARAP10276 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.58□□□□□ -1.84
RARAP10276 AL670379.3-201ENST00000605040 251 ntBASIC3.58□□□□□ -1.84
RARAP10276 MIR7851-201ENST00000610611 160 ntBASIC3.58□□□□□ -1.84
RARAP10276 uc_338.4-201ENST00000616635 176 ntBASIC3.58□□□□□ -1.84
RARAP10276 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RARAP10276 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.58□□□□□ -1.84
RARAP10276 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RARAP10276 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.57□□□□□ -1.84
RARAP10276 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RARAP10276 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RARAP10276 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RARAP10276 RNA5SP432-201ENST00000362480 116 ntBASIC3.57□□□□□ -1.84
RARAP10276 Y_RNA.203-201ENST00000364106 102 ntBASIC3.57□□□□□ -1.84
RARAP10276 Y_RNA.634-201ENST00000364811 113 ntBASIC3.57□□□□□ -1.84
RARAP10276 SNORD58C-201ENST00000365223 64 ntBASIC3.57□□□□□ -1.84
RARAP10276 RNU6-418P-201ENST00000384035 107 ntBASIC3.57□□□□□ -1.84
RARAP10276 RNU6-1235P-201ENST00000384559 107 ntBASIC3.57□□□□□ -1.84
RARAP10276 RNU6-136P-201ENST00000384663 107 ntBASIC3.57□□□□□ -1.84
RARAP10276 MIR200C-201ENST00000384980 68 ntBASIC3.57□□□□□ -1.84
RARAP10276 AL603914.1-201ENST00000401964 204 ntBASIC3.57□□□□□ -1.84
RARAP10276 RNU2-70P-201ENST00000410718 179 ntBASIC3.57□□□□□ -1.84
RARAP10276 AC016909.1-201ENST00000415916 166 ntBASIC3.57□□□□□ -1.84
RARAP10276 AC008134.1-201ENST00000420943 193 ntBASIC3.57□□□□□ -1.84
RARAP10276 ARF4P2-201ENST00000430209 526 ntBASIC3.57□□□□□ -1.84
RARAP10276 AL133547.1-201ENST00000448546 220 ntBASIC3.57□□□□□ -1.84
RARAP10276 AC245102.2-201ENST00000448956 180 ntBASIC3.57□□□□□ -1.84
RARAP10276 RNU6-498P-201ENST00000459468 107 ntBASIC3.57□□□□□ -1.84
RARAP10276 AC025518.1-201ENST00000479856 347 ntBASIC3.57□□□□□ -1.84
RARAP10276 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
RARAP10276 RPL23AP94-201ENST00000512518 302 ntBASIC3.57□□□□□ -1.84
RARAP10276 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.57□□□□□ -1.84
RARAP10276 AC107934.2-201ENST00000518653 310 ntBASIC3.57□□□□□ -1.84
RARAP10276 AC068657.1-201ENST00000520807 306 ntBASIC3.57□□□□□ -1.84
RARAP10276 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RARAP10276 RPL23AP91-201ENST00000569211 455 ntBASIC3.57□□□□□ -1.84
RARAP10276 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RARAP10276 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RARAP10276 SNORA71.3-201ENST00000362582 128 ntBASIC3.56□□□□□ -1.84
RARAP10276 RNU1-72P-201ENST00000362976 153 ntBASIC3.56□□□□□ -1.84
RARAP10276 RNU6-486P-201ENST00000363116 107 ntBASIC3.56□□□□□ -1.84
RARAP10276 SNORD17-201ENST00000390930 237 ntBASIC3.56□□□□□ -1.84
RARAP10276 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.56□□□□□ -1.84
RARAP10276 AC093578.1-201ENST00000415219 368 ntBASIC3.56□□□□□ -1.84
RARAP10276 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.56□□□□□ -1.84
RARAP10276 RPL30P4-201ENST00000429309 333 ntBASIC3.56□□□□□ -1.84
RARAP10276 AC006028.1-201ENST00000438379 402 ntBASIC3.56□□□□□ -1.84
RARAP10276 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.56□□□□□ -1.84
RARAP10276 SNORD11-201ENST00000459124 84 ntBASIC3.56□□□□□ -1.84
RARAP10276 AC104027.1-201ENST00000521887 300 ntBASIC3.56□□□□□ -1.84
RARAP10276 MIR2681-201ENST00000581814 105 ntBASIC3.56□□□□□ -1.84
RARAP10276 MIR3922-201ENST00000585192 84 ntBASIC3.56□□□□□ -1.84
RARAP10276 AC013412.1-201ENST00000610687 192 ntBASIC3.56□□□□□ -1.84
RARAP10276 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.56□□□□□ -1.84
RARAP10276 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.56□□□□□ -1.84
RARAP10276 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RARAP10276 AC103988.1-201ENST00000566382 2177 ntBASIC3.56□□□□□ -1.84
RARAP10276 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RARAP10276 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
RARAP10276 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RARAP10276 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RARAP10276 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RARAP10276 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.55□□□□□ -1.84
RARAP10276 Y_RNA.617-201ENST00000410920 90 ntBASIC3.55□□□□□ -1.84
RARAP10276 Z92545.1-201ENST00000411782 234 ntBASIC3.55□□□□□ -1.84
RARAP10276 AC009414.1-201ENST00000427200 443 ntBASIC3.55□□□□□ -1.84
RARAP10276 HMGN1P18-201ENST00000457642 277 ntBASIC3.55□□□□□ -1.84
RARAP10276 RPL27AP5-201ENST00000469428 449 ntBASIC3.55□□□□□ -1.84
RARAP10276 RPS27P22-201ENST00000478056 241 ntBASIC3.55□□□□□ -1.84
RARAP10276 Y_RNA.690-201ENST00000516603 95 ntBASIC3.55□□□□□ -1.84
RARAP10276 AC018630.3-201ENST00000542637 96 ntBASIC3.55□□□□□ -1.84
RARAP10276 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.55□□□□□ -1.84
RARAP10276 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.55□□□□□ -1.84
RARAP10276 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RARAP10276 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RARAP10276 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
RARAP10276 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RARAP10276 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RARAP10276 MIR148B-201ENST00000362252 99 ntBASIC3.54□□□□□ -1.84
RARAP10276 RNU4-35P-201ENST00000362588 141 ntBASIC3.54□□□□□ -1.84
RARAP10276 RNU6-508P-201ENST00000363231 103 ntBASIC3.54□□□□□ -1.84
RARAP10276 RNU6-647P-201ENST00000364243 107 ntBASIC3.54□□□□□ -1.84
RARAP10276 RNU6-1240P-201ENST00000365155 104 ntBASIC3.54□□□□□ -1.84
RARAP10276 RNU6-1083P-201ENST00000384022 107 ntBASIC3.54□□□□□ -1.84
RARAP10276 SNORD116-21-201ENST00000384507 92 ntBASIC3.54□□□□□ -1.84
RARAP10276 RPS4XP11-201ENST00000446897 772 ntBASIC3.54□□□□□ -1.84
RARAP10276 AC023449.1-201ENST00000454464 154 ntBASIC3.54□□□□□ -1.84
RARAP10276 RPL23AP67-201ENST00000465341 474 ntBASIC3.54□□□□□ -1.84
RARAP10276 RPS26P45-201ENST00000471748 340 ntBASIC3.54□□□□□ -1.84
RARAP10276 SCARNA17.1-201ENST00000516211 143 ntBASIC3.54□□□□□ -1.84
RARAP10276 SCARNA17.2-201ENST00000516334 143 ntBASIC3.54□□□□□ -1.84
RARAP10276 IGKV2-26-201ENST00000518305 343 ntBASIC3.54□□□□□ -1.84
RARAP10276 AC026403.1-201ENST00000518938 295 ntBASIC3.54□□□□□ -1.84
RARAP10276 AC105245.1-201ENST00000581934 244 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms