Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RPL19P1-201ENST00000411635 428 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 EDDM3CP-201ENST00000415977 425 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 AC016717.1-201ENST00000448918 286 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 SNORA4.4-201ENST00000515921 135 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 SNORA9.3-201ENST00000516383 129 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 RNU6-1271P-201ENST00000517049 105 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 AC026271.5-201ENST00000577873 130 ntBASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.73□□□□□ -1.97
CCM2LQ9NUG4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 Y_RNA.136-201ENST00000363444 102 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 RNU6-324P-201ENST00000363957 106 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 SNORD115-30-201ENST00000364117 82 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 Y_RNA.489-201ENST00000384410 101 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 RNU6-443P-201ENST00000384780 107 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 MIR1261-201ENST00000408659 82 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 AC245102.2-201ENST00000448956 180 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 MIR4435-1-201ENST00000582552 80 ntBASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCM2LQ9NUG4 AL161431.1-201ENST00000618966 4205 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 MIR22-201ENST00000362190 85 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 Y_RNA.243-201ENST00000364481 109 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 SNORD14D-201ENST00000384390 87 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 U3.40-201ENST00000408706 208 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 AC024067.1-201ENST00000426199 223 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 MTCO1P44-201ENST00000441935 243 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 MRPS10P1-201ENST00000448483 130 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 RNU6-966P-201ENST00000516479 104 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 RNU6-856P-201ENST00000516959 98 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 MIR3671-201ENST00000580455 88 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 AC012433.1-201ENST00000588916 398 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 U2.14-201ENST00000615943 113 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 U6.115-201ENST00000636045 103 ntBASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.71□□□□□ -1.98
CCM2LQ9NUG4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 Y_RNA.447-201ENST00000384184 113 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 Y_RNA.478-201ENST00000384358 107 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 AL031003.1-201ENST00000404229 172 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 SNORA70.12-201ENST00000516084 153 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 SCARNA24.2-201ENST00000516968 130 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 ELOCP29-201ENST00000588193 334 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 AC005828.6-201ENST00000606610 232 ntBASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.7□□□□□ -1.98
CCM2LQ9NUG4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 RNU4-82P-201ENST00000362443 140 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 RNU1-91P-201ENST00000364746 163 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 Y_RNA.476-201ENST00000384347 108 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 RNU6-160P-201ENST00000384591 107 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 RNU6-1248P-201ENST00000391096 64 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 AC025647.1-201ENST00000517879 253 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 CYCSP26-201ENST00000534107 320 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 AC004486.1-201ENST00000546846 233 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 MIR3126-201ENST00000577443 74 ntBASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.69□□□□□ -1.98
CCM2LQ9NUG4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 RNU6-271P-201ENST00000363858 105 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 Y_RNA.361-201ENST00000365515 120 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 MTCO1P5-201ENST00000433573 344 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 RNU6-1023P-201ENST00000516137 106 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 RNA5SP367-201ENST00000516557 118 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 AC087441.2-201ENST00000529141 262 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 MIR3670-2-201ENST00000582974 65 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 MIR3670-1-201ENST00000584160 65 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 MIR4658-201ENST00000584344 65 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 MIR3670-3-201ENST00000584855 65 ntBASIC2.68□□□□□ -1.98
CCM2LQ9NUG4 MIR3670-4-201ENST00000612260 65 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms