Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MRPL35P1-201ENST00000404272 572 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AL357139.1-201ENST00000407792 426 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC009238.1-201ENST00000442165 424 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC009237.6-201ENST00000446969 424 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 MTND5P22-201ENST00000458380 195 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 U8.20-201ENST00000459445 131 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC067942.3-201ENST00000512025 362 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 SNORA40.9-201ENST00000515895 93 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 RNU6-1045P-201ENST00000516321 107 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 RNU6-667P-201ENST00000517186 102 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 CYCSP23-201ENST00000519781 313 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 RRN3P3-201ENST00000549207 578 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 MIR4659A-201ENST00000580269 81 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC008737.2-201ENST00000599446 118 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AL021879.1-201ENST00000611756 288 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC011476.5-201ENST00000615594 130 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC240442.1-201ENST00000616055 283 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 uc_338.20-201ENST00000621563 178 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 AC068205.3-201ENST00000636385 468 ntBASIC1.95□□□□□ -2.1
SIX2Q9NPC8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SIX2Q9NPC8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
SIX2Q9NPC8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
SIX2Q9NPC8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RNU6-545P-201ENST00000362681 104 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RNU6-743P-201ENST00000364151 106 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 SNORD87-201ENST00000364849 89 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 SNORD31B-201ENST00000364977 69 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RNU6-611P-201ENST00000384276 104 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.471-201ENST00000384312 102 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 MIR586-201ENST00000385035 97 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RNU6-130P-201ENST00000411112 103 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 UQCRBP2-201ENST00000447827 297 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 PCNPP5-201ENST00000452246 481 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 HMGN2P9-201ENST00000476875 229 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 TRBV12-1-201ENST00000479785 344 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RPL26P26-201ENST00000480251 434 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 AC074133.1-201ENST00000515696 183 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RNU6-1046P-201ENST00000516538 107 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RNU1-117P-201ENST00000517041 158 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RNA5SP490-201ENST00000517141 136 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 NDUFA5P6-201ENST00000542110 379 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 AC233702.2-202ENST00000562547 291 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 MIR4658-201ENST00000584344 65 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 AC136443.5-201ENST00000603741 370 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 AL355297.3-201ENST00000604082 446 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 AC005034.5-201ENST00000604219 466 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 RAC1P9-201ENST00000604990 392 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.94□□□□□ -2.1
SIX2Q9NPC8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SIX2Q9NPC8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SIX2Q9NPC8 RNU6-1026P-201ENST00000384465 108 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 MIR300-201ENST00000401138 83 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 MIR1283-1-201ENST00000408494 87 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 ELOCP21-201ENST00000412558 336 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 AC073910.1-201ENST00000445047 438 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 HMGN2P18-201ENST00000450680 270 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 AC016925.1-201ENST00000458303 298 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 UBL5P3-201ENST00000475112 231 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 AC010655.3-201ENST00000478818 450 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.93□□□□□ -2.1
SIX2Q9NPC8 AC131281.1-201ENST00000522984 164 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 AK6P2-201ENST00000549020 471 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.93□□□□□ -2.1
SIX2Q9NPC8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.93□□□□□ -2.1
SIX2Q9NPC8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SIX2Q9NPC8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SIX2Q9NPC8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIX2Q9NPC8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIX2Q9NPC8 SNORD114-1-201ENST00000362705 72 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 RNU6-961P-201ENST00000363893 105 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 SNORA70B-201ENST00000384210 135 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 snosnR66.1-201ENST00000391095 99 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 MIR548F4-201ENST00000408515 105 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 AC093259.1-201ENST00000509755 300 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 RNU6-991P-201ENST00000516168 107 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 RNU1-104P-201ENST00000517280 175 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 AC018448.1-201ENST00000552843 316 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 MIR4513-201ENST00000581077 86 ntBASIC1.92□□□□□ -2.1
SIX2Q9NPC8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.92□□□□□ -2.1
SIX2Q9NPC8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIX2Q9NPC8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
SIX2Q9NPC8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.210-201ENST00000364161 110 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 RNU6-1305P-201ENST00000364353 104 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.276-201ENST00000364732 109 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.332-201ENST00000365271 113 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 Y_RNA.459-201ENST00000384251 102 ntBASIC1.91□□□□□ -2.1
SIX2Q9NPC8 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms