Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RN7SKP83-201ENST00000516512 178 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNU7-143P-201ENST00000516781 65 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RN7SKP209-201ENST00000516888 304 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AC091544.4-201ENST00000555268 342 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AC133485.4-201ENST00000561835 220 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AC138907.4-201ENST00000570107 226 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNVU1-4-201ENST00000612985 164 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 MIR6889-201ENST00000613185 59 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 MIR6129-201ENST00000616087 109 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 U6.108-201ENST00000637764 58 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AL049767.1-202ENST00000637826 242 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 Z83843.1-201ENST00000604070 3685 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 TNPO1P3-201ENST00000436471 2662 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC080100.1-201ENST00000624239 5356 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 MIR331-201ENST00000362302 94 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 SNORA60-201ENST00000362396 134 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP191-201ENST00000362585 102 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP123-201ENST00000363244 119 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP242-201ENST00000364171 118 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP479-201ENST00000364858 117 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 MIR548A2-201ENST00000384956 97 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 Z98941.1-201ENST00000407764 100 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RN7SKP213-201ENST00000410746 298 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP136-201ENST00000410906 107 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 SNORA57.3-201ENST00000411095 141 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 CYCSP19-201ENST00000411715 316 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 COX6B1P1-201ENST00000415962 213 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AL157831.1-201ENST00000426134 473 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 SNRPGP10-201ENST00000432323 225 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC244505.4-201ENST00000434905 287 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 SNRPGP13-201ENST00000442212 177 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 SSXP5-201ENST00000443473 287 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 PHBP16-201ENST00000446318 950 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC109327.1-201ENST00000471666 403 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RN7SL481P-201ENST00000477764 299 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 SNORD33.1-201ENST00000516213 88 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNU7-28P-201ENST00000516759 62 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 RNU6-667P-201ENST00000517186 102 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 IGKV1-32-201ENST00000519290 311 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AP001781.1-201ENST00000530977 207 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC025627.2-201ENST00000576220 160 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 MIR3691-201ENST00000578066 90 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 MIR3934-201ENST00000579806 107 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 MIR5197-201ENST00000583721 112 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC006130.2-201ENST00000586202 326 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AL355297.2-201ENST00000604792 129 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC113403.1-201ENST00000604910 193 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 MIR6780B-201ENST00000610307 79 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 AC006441.5-201ENST00000612680 209 ntBASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC1.06□□□□□ -2.24
LCE3DQ9BYE3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 AC007336.1-201ENST00000576365 3828 ntBASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 RNU6-235P-201ENST00000362644 107 ntBASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 RNU1-14P-201ENST00000362759 152 ntBASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.05□□□□□ -2.24
LCE3DQ9BYE3 SNORD116-21-201ENST00000384507 92 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms