Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-1077P-201ENST00000410506 102 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 AC009969.1-201ENST00000438726 172 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 RNA5SP309-201ENST00000516670 106 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 RNU6-341P-201ENST00000516973 96 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 RNU7-128P-201ENST00000517247 62 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.9□□□□□ -1.79
USB1Q9BQ65 AL358944.1-201ENST00000528537 144 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 AC100770.1-201ENST00000532310 322 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 AC113403.1-201ENST00000604910 193 ntBASIC3.9□□□□□ -1.79
USB1Q9BQ65 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
USB1Q9BQ65 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
USB1Q9BQ65 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.9□□□□□ -1.79
USB1Q9BQ65 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USB1Q9BQ65 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.89□□□□□ -1.79
USB1Q9BQ65 MIR423-201ENST00000362201 94 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 RNU4-36P-201ENST00000364294 144 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 RNY1P6-201ENST00000384193 109 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 FTH1P12-201ENST00000432137 551 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 RNU7-123P-201ENST00000515911 60 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 DEFB131E-201ENST00000532329 154 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.89□□□□□ -1.79
USB1Q9BQ65 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.89□□□□□ -1.79
USB1Q9BQ65 AC244505.7-201ENST00000599675 272 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 AC140479.6-201ENST00000633535 357 ntBASIC3.89□□□□□ -1.79
USB1Q9BQ65 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.89□□□□□ -1.79
USB1Q9BQ65 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.88□□□□□ -1.79
USB1Q9BQ65 snoU2-30.2-201ENST00000362805 70 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 RNU1-133P-201ENST00000364867 167 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 Y_RNA.332-201ENST00000365271 113 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 MIR522-201ENST00000385071 87 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 RNU6-893P-201ENST00000458841 100 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 AC010401.1-201ENST00000463867 348 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 RNA5SP446-201ENST00000515955 82 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 AC022523.2-201ENST00000561045 150 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.88□□□□□ -1.79
USB1Q9BQ65 AC025521.1-201ENST00000621624 286 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 MIR6810-201ENST00000622701 70 ntBASIC3.88□□□□□ -1.79
USB1Q9BQ65 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USB1Q9BQ65 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USB1Q9BQ65 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USB1Q9BQ65 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
USB1Q9BQ65 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USB1Q9BQ65 AC091564.4-201ENST00000533934 2194 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.87□□□□□ -1.79
USB1Q9BQ65 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.87□□□□□ -1.79
USB1Q9BQ65 RNA5SP366-201ENST00000365454 123 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 SNORA74C-2-201ENST00000411179 201 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 RPS12P18-201ENST00000442381 270 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
USB1Q9BQ65 AC109327.1-201ENST00000471666 403 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 AC106707.2-201ENST00000484182 374 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 SCARNA23-201ENST00000516060 130 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
USB1Q9BQ65 AC091544.4-201ENST00000555268 342 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.87□□□□□ -1.79
USB1Q9BQ65 MIR6830-201ENST00000636015 70 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USB1Q9BQ65 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USB1Q9BQ65 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USB1Q9BQ65 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USB1Q9BQ65 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
USB1Q9BQ65 TNPO1P3-201ENST00000436471 2662 ntBASIC3.87□□□□□ -1.79
USB1Q9BQ65 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USB1Q9BQ65 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USB1Q9BQ65 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USB1Q9BQ65 RNY3P2-201ENST00000362918 102 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 SNORD115-28-201ENST00000363931 81 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 MIR659-201ENST00000384963 97 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 RNU6-816P-201ENST00000390914 107 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 RNU6-1268P-201ENST00000391214 107 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 RNU6-1239P-201ENST00000391310 107 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 AP000567.1-201ENST00000406413 156 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 MIR1912-201ENST00000410389 80 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 RN7SKP167-201ENST00000411047 285 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 AC091390.1-201ENST00000433904 331 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 AC009238.1-201ENST00000442165 424 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 AC009237.6-201ENST00000446969 424 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 RNU1-131P-201ENST00000458943 161 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 RNU6-991P-201ENST00000516168 107 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 RNU7-25P-201ENST00000516544 62 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 AC006441.5-201ENST00000612680 209 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 UCA1.1-201ENST00000620952 75 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 MIR3653-201ENST00000625572 110 ntBASIC3.86□□□□□ -1.79
USB1Q9BQ65 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USB1Q9BQ65 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.86□□□□□ -1.79
USB1Q9BQ65 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
USB1Q9BQ65 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
USB1Q9BQ65 MIR340-201ENST00000362125 95 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 Y_RNA.37-201ENST00000362606 108 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 RNA5SP175-201ENST00000364275 119 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 Y_RNA.466-201ENST00000384294 113 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 RNA5SP467-201ENST00000391274 118 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 Y_RNA.593-201ENST00000410292 98 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 AC099677.2-201ENST00000436385 175 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 AL161788.1-201ENST00000441805 169 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 AL049830.1-201ENST00000468034 425 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 AC026726.1-201ENST00000512859 601 ntBASIC3.85□□□□□ -1.79
USB1Q9BQ65 MIR2116-201ENST00000517221 80 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms