Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-3Q8TAU0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-1209P-201ENST00000363655 107 ntBASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 Y_RNA.344-201ENST00000365381 112 ntBASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 RN7SL807P-201ENST00000470923 297 ntBASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 RPL23AP94-201ENST00000512518 302 ntBASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 AC107934.2-201ENST00000518653 310 ntBASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NKX2-3Q8TAU0 IPO8P1-201ENST00000455509 3109 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-1125P-201ENST00000363601 107 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-1240P-201ENST00000365155 104 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-117P-201ENST00000365415 107 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-979P-201ENST00000383896 107 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 SNORA48.2-201ENST00000390926 124 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RNA5SP239-201ENST00000410218 129 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RPL23AP67-201ENST00000465341 474 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 AL049873.1-201ENST00000480540 376 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RPS29P20-201ENST00000489592 171 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-63P-201ENST00000516690 95 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 RPS15AP11-201ENST00000594193 385 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 AL162726.3-218ENST00000636401 95 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 AC004944.1-201ENST00000517807 3059 ntBASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-3Q8TAU0 AC026241.1-201ENST00000517873 2142 ntBASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 EIF4EP4-201ENST00000424916 578 ntBASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 AL161651.1-201ENST00000440882 223 ntBASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 RNU2-58P-201ENST00000516403 183 ntBASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 AC011602.1-201ENST00000546484 331 ntBASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 AC006435.5-201ENST00000624486 112 ntBASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-3Q8TAU0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RNY3P2-201ENST00000362918 102 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 SNORD24-201ENST00000383884 75 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-748P-201ENST00000384648 107 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 MIR181A2-201ENST00000384863 110 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 MIR548D2-201ENST00000384955 97 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RNA5SP354-201ENST00000391247 136 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RPL21P3-201ENST00000395517 478 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 AL451046.2-201ENST00000403074 277 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 DBIP2-201ENST00000419076 262 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RNU7-171P-201ENST00000459581 62 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 AC107626.1-201ENST00000471084 183 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RNU6-240P-201ENST00000516098 97 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RNU1-61P-201ENST00000516107 151 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 RNY4P20-201ENST00000516678 93 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 SNORA70.18-201ENST00000516696 98 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 AC007229.1-201ENST00000590455 412 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 MIR3199-2-201ENST00000636243 86 ntBASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
NKX2-3Q8TAU0 AC000403.1-201ENST00000613696 3585 ntBASIC4.4□□□□□ -1.7
NKX2-3Q8TAU0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-3Q8TAU0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.4□□□□□ -1.7
NKX2-3Q8TAU0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-3Q8TAU0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
NKX2-3Q8TAU0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-3Q8TAU0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NKX2-3Q8TAU0 RNA5SP50-201ENST00000363731 107 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 MIR1912-201ENST00000410389 80 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 Y_RNA.601-201ENST00000410500 113 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 AC096949.1-201ENST00000412047 152 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 RNU7-57P-201ENST00000459540 60 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 AP001486.1-201ENST00000463339 476 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 RNA5SP164-201ENST00000516533 110 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 HSPE1P18-201ENST00000517602 280 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 MIR5588-201ENST00000581890 63 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 MIR6852-201ENST00000621699 66 ntBASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NKX2-3Q8TAU0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms