Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NCKAP1LP55160 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.21□□□□□ -1.9
NCKAP1LP55160 U3.8-201ENST00000363675 217 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 RNU6-80P-201ENST00000384195 107 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 RNU6-851P-201ENST00000384565 107 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 Y_RNA.563-201ENST00000384707 108 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 RNU6-19P-201ENST00000384718 107 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.2□□□□□ -1.9
NCKAP1LP55160 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 RNA5SP310-201ENST00000459084 116 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 AC107626.1-201ENST00000471084 183 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKAP1LP55160 RNU6-107P-201ENST00000516643 102 ntBASIC3.2□□□□□ -1.9
NCKAP1LP55160 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.2□□□□□ -1.9
NCKAP1LP55160 Y_RNA.24-201ENST00000362508 103 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 SNORD114-7-201ENST00000362520 77 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 Y_RNA.420-201ENST00000384043 110 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 RNU6-44P-201ENST00000384045 107 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 Y_RNA.542-201ENST00000384641 111 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 EEF1A1P41-201ENST00000414667 207 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 AC027124.2-201ENST00000428249 105 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.19□□□□□ -1.9
NCKAP1LP55160 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 SCARNA13-201ENST00000516672 275 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 MIR3646-201ENST00000578301 84 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 LARP7P3-201ENST00000579888 337 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.19□□□□□ -1.9
NCKAP1LP55160 AL137843.1-201ENST00000605078 385 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 TUG1_4.1-201ENST00000619464 181 ntBASIC3.19□□□□□ -1.9
NCKAP1LP55160 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.19□□□□□ -1.9
NCKAP1LP55160 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NCKAP1LP55160 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NCKAP1LP55160 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NCKAP1LP55160 Y_RNA.293-201ENST00000364908 93 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 RNU6-969P-201ENST00000383900 105 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 RNU6-144P-201ENST00000383951 107 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 MIR634-201ENST00000385208 97 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.18□□□□□ -1.9
NCKAP1LP55160 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 SCGB1D5P-201ENST00000515134 247 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 AC112693.2-201ENST00000556538 232 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.18□□□□□ -1.9
NCKAP1LP55160 AP001340.1-201ENST00000624405 217 ntBASIC3.18□□□□□ -1.9
NCKAP1LP55160 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.18□□□□□ -1.9
NCKAP1LP55160 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NCKAP1LP55160 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.18□□□□□ -1.9
NCKAP1LP55160 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NCKAP1LP55160 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NCKAP1LP55160 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.17□□□□□ -1.9
NCKAP1LP55160 SNORD114-19-201ENST00000363072 75 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RNU6-153P-201ENST00000364422 104 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 SNORA51.4-201ENST00000364993 124 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 Y_RNA.341-201ENST00000365341 102 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 SNORA18.2-201ENST00000383865 132 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 SNORA20-201ENST00000384662 132 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RNU6-1228P-201ENST00000391014 107 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 AC022018.1-201ENST00000430685 241 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RNU7-141P-201ENST00000459304 62 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RNU7-23P-201ENST00000459465 62 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RPS27P26-201ENST00000494583 239 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RNU6-659P-201ENST00000516454 104 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RNU6-1234P-201ENST00000516877 103 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 MIR5006-201ENST00000583027 110 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
NCKAP1LP55160 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
NCKAP1LP55160 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NCKAP1LP55160 RNU6-1325P-201ENST00000364905 105 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 RNU6-643P-201ENST00000384018 107 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 AL133475.1-201ENST00000404414 305 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 RNU6-855P-201ENST00000410395 104 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 RNU4-43P-201ENST00000410628 137 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
NCKAP1LP55160 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
NCKAP1LP55160 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.16□□□□□ -1.9
NCKAP1LP55160 snoU13.28-201ENST00000459235 104 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
NCKAP1LP55160 AC092991.1-201ENST00000477176 376 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 AC145146.1-201ENST00000496370 254 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 RNU2-44P-201ENST00000516795 194 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 MIR6076-201ENST00000617521 113 ntBASIC3.16□□□□□ -1.9
NCKAP1LP55160 RNU6-199P-201ENST00000362954 107 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 RNU6-1205P-201ENST00000363625 106 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 RNU6-1210P-201ENST00000363775 107 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 Y_RNA.229-201ENST00000364347 113 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 Z92545.1-201ENST00000411782 234 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 AC010154.1-201ENST00000425857 269 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 AL365496.1-201ENST00000426885 215 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.15□□□□□ -1.91
NCKAP1LP55160 RNU6-1211P-201ENST00000459179 105 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
NCKAP1LP55160 RNU4-57P-201ENST00000515980 135 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 Y_RNA.686-201ENST00000516548 134 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 RNU6-1007P-201ENST00000516586 107 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 RNU6-711P-201ENST00000517255 106 ntBASIC3.15□□□□□ -1.91
NCKAP1LP55160 RPL17P51-201ENST00000605218 238 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms