Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CLCN1P35523 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN1P35523 Y_RNA.35-201ENST00000362601 101 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 RNU6-508P-201ENST00000363231 103 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 RNA5SP399-201ENST00000364003 117 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 RNU6-546P-201ENST00000383991 107 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 Y_RNA.617-201ENST00000410920 90 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 RNA5SP127-201ENST00000411051 133 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 Y_RNA.621-201ENST00000411065 96 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 RNU2-32P-201ENST00000411193 191 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 SNORA4.4-201ENST00000515921 135 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 SNORA31.9-201ENST00000516429 84 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 AC068657.1-201ENST00000520807 306 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 MRPL49P2-201ENST00000521066 465 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 MIR6867-201ENST00000610636 67 ntBASIC4.27□□□□□ -1.73
CLCN1P35523 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCN1P35523 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLCN1P35523 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CLCN1P35523 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCN1P35523 Y_RNA.52-201ENST00000362760 96 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 RNU6-1138P-201ENST00000365359 106 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLCN1P35523 AL356095.1-201ENST00000417217 199 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 AC006028.1-201ENST00000438379 402 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 AL133162.1-201ENST00000463228 453 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN1P35523 RNU6-781P-201ENST00000516377 101 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 RNU6-365P-201ENST00000517113 106 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 MIR2116-201ENST00000517221 80 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 RNU1-104P-201ENST00000517280 175 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN1P35523 PRELID2P1-201ENST00000552837 301 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 MIR492-201ENST00000638676 116 ntBASIC4.26□□□□□ -1.73
CLCN1P35523 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CLCN1P35523 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN1P35523 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN1P35523 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.26□□□□□ -1.73
CLCN1P35523 AC080128.1-201ENST00000474389 1917 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 PWAR6-201ENST00000552334 4618 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 Y_RNA.486-201ENST00000384398 107 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 MIR624-201ENST00000385217 97 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 AC025750.2-201ENST00000442609 450 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 RPL21P10-201ENST00000463521 490 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 RNU6-1096P-201ENST00000517089 102 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 YPEL5P3-201ENST00000547227 352 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 MIR3199-1-201ENST00000582434 88 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 AL022345.2-201ENST00000606307 135 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 AC004832.5-201ENST00000608677 401 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 AC034229.5-201ENST00000624258 185 ntBASIC4.25□□□□□ -1.73
CLCN1P35523 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN1P35523 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.25□□□□□ -1.73
CLCN1P35523 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN1P35523 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN1P35523 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLCN1P35523 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLCN1P35523 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN1P35523 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN1P35523 Y_RNA.346-201ENST00000365385 112 ntBASIC4.24□□□□□ -1.73
CLCN1P35523 MIR134-201ENST00000385258 73 ntBASIC4.24□□□□□ -1.73
CLCN1P35523 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.24□□□□□ -1.73
CLCN1P35523 MTATP6P21-201ENST00000440681 189 ntBASIC4.24□□□□□ -1.73
CLCN1P35523 MTCO1P44-201ENST00000441935 243 ntBASIC4.24□□□□□ -1.73
CLCN1P35523 CKS1BP2-201ENST00000497342 240 ntBASIC4.24□□□□□ -1.73
CLCN1P35523 RN7SKP19-201ENST00000516016 252 ntBASIC4.24□□□□□ -1.73
CLCN1P35523 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCN1P35523 MIR8058-201ENST00000615737 89 ntBASIC4.24□□□□□ -1.73
CLCN1P35523 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.24□□□□□ -1.73
CLCN1P35523 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLCN1P35523 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN1P35523 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN1P35523 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN1P35523 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.23□□□□□ -1.73
CLCN1P35523 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN1P35523 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN1P35523 U6atac.2-201ENST00000408644 118 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 AL513477.1-202ENST00000417061 214 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 AC006989.1-201ENST00000427212 131 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 AC009969.1-201ENST00000438726 172 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 SNORD59.2-201ENST00000516873 68 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 SCARNA3-201ENST00000517097 143 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 NDUFA5P6-201ENST00000542110 379 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCN1P35523 AL365205.2-201ENST00000594586 68 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 ZYXP1-201ENST00000617638 118 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 U6.73-201ENST00000619194 103 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 MIR7157-201ENST00000635801 60 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 MIR7515-201ENST00000637837 67 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 AC008555.8-201ENST00000623602 2168 ntBASIC4.23□□□□□ -1.73
CLCN1P35523 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCN1P35523 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCN1P35523 RNA5SP139-201ENST00000364340 117 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 RNU6-1164P-201ENST00000364428 107 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 Y_RNA.309-201ENST00000365046 111 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 RNU6-880P-201ENST00000384526 107 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 MIR548A1-201ENST00000385041 97 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 MIR520G-201ENST00000385064 90 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 MIR891A-201ENST00000401237 79 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 RNA5SP89-201ENST00000410300 108 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 RNU6-1328P-201ENST00000410938 106 ntBASIC4.22□□□□□ -1.73
CLCN1P35523 MICF-203ENST00000432679 129 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms