Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SDHAP31040 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDHAP31040 SNORA48.5-201ENST00000391143 135 ntBASIC2.79□□□□□ -1.96
SDHAP31040 RNA5SP274-201ENST00000410484 108 ntBASIC2.79□□□□□ -1.96
SDHAP31040 AC123900.1-201ENST00000420390 96 ntBASIC2.79□□□□□ -1.96
SDHAP31040 AL445687.1-201ENST00000439946 251 ntBASIC2.79□□□□□ -1.96
SDHAP31040 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.79□□□□□ -1.96
SDHAP31040 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.79□□□□□ -1.96
SDHAP31040 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.79□□□□□ -1.96
SDHAP31040 RNA5SP20-201ENST00000515976 84 ntBASIC2.79□□□□□ -1.96
SDHAP31040 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.79□□□□□ -1.96
SDHAP31040 AC068647.2-201ENST00000637380 353 ntBASIC2.79□□□□□ -1.96
SDHAP31040 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.79□□□□□ -1.96
SDHAP31040 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDHAP31040 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.79□□□□□ -1.96
SDHAP31040 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SDHAP31040 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.79□□□□□ -1.96
SDHAP31040 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SDHAP31040 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SDHAP31040 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.78□□□□□ -1.96
SDHAP31040 RNU6-1205P-201ENST00000363625 106 ntBASIC2.78□□□□□ -1.96
SDHAP31040 RNU4-10P-201ENST00000364383 140 ntBASIC2.78□□□□□ -1.96
SDHAP31040 Y_RNA.464-201ENST00000384282 110 ntBASIC2.78□□□□□ -1.96
SDHAP31040 MIR627-201ENST00000384979 97 ntBASIC2.78□□□□□ -1.96
SDHAP31040 MIR1253-201ENST00000408273 105 ntBASIC2.78□□□□□ -1.96
SDHAP31040 RN7SKP51-201ENST00000410781 304 ntBASIC2.78□□□□□ -1.96
SDHAP31040 AL357134.1-201ENST00000445848 426 ntBASIC2.78□□□□□ -1.96
SDHAP31040 HSPE1P13-201ENST00000451143 297 ntBASIC2.78□□□□□ -1.96
SDHAP31040 RNU7-141P-201ENST00000459304 62 ntBASIC2.78□□□□□ -1.96
SDHAP31040 RPS26P55-201ENST00000471178 356 ntBASIC2.78□□□□□ -1.96
SDHAP31040 RPS27P22-201ENST00000478056 241 ntBASIC2.78□□□□□ -1.96
SDHAP31040 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.78□□□□□ -1.96
SDHAP31040 AC090616.3-201ENST00000582184 217 ntBASIC2.78□□□□□ -1.96
SDHAP31040 AC008739.3-201ENST00000603262 127 ntBASIC2.78□□□□□ -1.96
SDHAP31040 AC090115.4-201ENST00000609970 188 ntBASIC2.78□□□□□ -1.96
SDHAP31040 AC245060.5-201ENST00000610778 3293 ntBASIC2.78□□□□□ -1.96
SDHAP31040 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.78□□□□□ -1.96
SDHAP31040 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.78□□□□□ -1.96
SDHAP31040 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDHAP31040 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SDHAP31040 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDHAP31040 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDHAP31040 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SDHAP31040 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.77□□□□□ -1.97
SDHAP31040 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDHAP31040 Y_RNA.7-201ENST00000362352 102 ntBASIC2.77□□□□□ -1.97
SDHAP31040 Y_RNA.172-201ENST00000363765 102 ntBASIC2.77□□□□□ -1.97
SDHAP31040 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.77□□□□□ -1.97
SDHAP31040 Y_RNA.332-201ENST00000365271 113 ntBASIC2.77□□□□□ -1.97
SDHAP31040 Y_RNA.435-201ENST00000384095 112 ntBASIC2.77□□□□□ -1.97
SDHAP31040 SNORA8.3-201ENST00000384679 139 ntBASIC2.77□□□□□ -1.97
SDHAP31040 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
SDHAP31040 MIR183-201ENST00000384958 110 ntBASIC2.77□□□□□ -1.97
SDHAP31040 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SDHAP31040 RNU2-2P-201ENST00000410396 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 RNU4-47P-201ENST00000410876 114 ntBASIC2.77□□□□□ -1.97
SDHAP31040 AC010154.1-201ENST00000425857 269 ntBASIC2.77□□□□□ -1.97
SDHAP31040 RNU6-1219P-201ENST00000516143 112 ntBASIC2.77□□□□□ -1.97
SDHAP31040 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
SDHAP31040 AC100767.1-201ENST00000528178 123 ntBASIC2.77□□□□□ -1.97
SDHAP31040 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.77□□□□□ -1.97
SDHAP31040 RNU2-4P-201ENST00000606190 192 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.15-201ENST00000611544 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.16-201ENST00000613119 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.12-201ENST00000613778 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.9-201ENST00000615427 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.11-201ENST00000616345 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.2-201ENST00000616535 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.3-201ENST00000617785 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 AL449363.1-201ENST00000617815 186 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.19-201ENST00000618602 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 RNU2-1-201ENST00000618664 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.6-201ENST00000619225 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.5-201ENST00000619465 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U2.10-201ENST00000620268 191 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U6.106-201ENST00000636360 105 ntBASIC2.77□□□□□ -1.97
SDHAP31040 U6.105-201ENST00000637379 88 ntBASIC2.77□□□□□ -1.97
SDHAP31040 MIR622-201ENST00000638396 96 ntBASIC2.77□□□□□ -1.97
SDHAP31040 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SDHAP31040 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDHAP31040 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SDHAP31040 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
SDHAP31040 AL159152.1-201ENST00000635019 2587 ntBASIC2.76□□□□□ -1.97
SDHAP31040 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.76□□□□□ -1.97
SDHAP31040 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.76□□□□□ -1.97
SDHAP31040 AL356292.1-201ENST00000283110 373 ntBASIC2.76□□□□□ -1.97
SDHAP31040 SNORA71.3-201ENST00000362582 128 ntBASIC2.76□□□□□ -1.97
SDHAP31040 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SDHAP31040 SNORA7.4-201ENST00000384249 137 ntBASIC2.76□□□□□ -1.97
SDHAP31040 SNORD116-13-201ENST00000384408 92 ntBASIC2.76□□□□□ -1.97
SDHAP31040 SNORD15B-201ENST00000384714 146 ntBASIC2.76□□□□□ -1.97
SDHAP31040 Y_RNA.571-201ENST00000384753 98 ntBASIC2.76□□□□□ -1.97
SDHAP31040 MIR7-3-201ENST00000384898 110 ntBASIC2.76□□□□□ -1.97
SDHAP31040 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
SDHAP31040 RNA5SP171-201ENST00000391071 115 ntBASIC2.76□□□□□ -1.97
SDHAP31040 AL355497.1-201ENST00000406262 551 ntBASIC2.76□□□□□ -1.97
SDHAP31040 RNU2-48P-201ENST00000410694 191 ntBASIC2.76□□□□□ -1.97
SDHAP31040 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.76□□□□□ -1.97
SDHAP31040 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.76□□□□□ -1.97
SDHAP31040 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms