Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RNU6-1138P-201ENST00000365359 106 ntBASIC5.13□□□□□ -1.59
CHGAP10645 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.13□□□□□ -1.59
CHGAP10645 AC097462.1-201ENST00000514125 324 ntBASIC5.13□□□□□ -1.59
CHGAP10645 MIR4438-201ENST00000585271 93 ntBASIC5.13□□□□□ -1.59
CHGAP10645 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC5.13□□□□□ -1.59
CHGAP10645 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.12□□□□□ -1.59
CHGAP10645 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.12□□□□□ -1.59
CHGAP10645 Y_RNA.796-201ENST00000364268 102 ntBASIC5.12□□□□□ -1.59
CHGAP10645 Y_RNA.799-201ENST00000364992 102 ntBASIC5.12□□□□□ -1.59
CHGAP10645 MIR562-201ENST00000384894 95 ntBASIC5.12□□□□□ -1.59
CHGAP10645 MIR708-201ENST00000390708 88 ntBASIC5.12□□□□□ -1.59
CHGAP10645 OR9P1P-201ENST00000496431 281 ntBASIC5.12□□□□□ -1.59
CHGAP10645 SNORA18.4-201ENST00000516440 124 ntBASIC5.12□□□□□ -1.59
CHGAP10645 RNU7-172P-201ENST00000517125 64 ntBASIC5.12□□□□□ -1.59
CHGAP10645 YPEL5P2-201ENST00000605553 359 ntBASIC5.12□□□□□ -1.59
CHGAP10645 AC004832.5-201ENST00000608677 401 ntBASIC5.12□□□□□ -1.59
CHGAP10645 Pinc.1-201ENST00000616452 154 ntBASIC5.12□□□□□ -1.59
CHGAP10645 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.12□□□□□ -1.59
CHGAP10645 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHGAP10645 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CHGAP10645 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CHGAP10645 AL365361.1-201ENST00000566942 3481 ntBASIC5.11□□□□□ -1.59
CHGAP10645 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHGAP10645 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHGAP10645 OTUD4P1-201ENST00000237841 3067 ntBASIC5.11□□□□□ -1.59
CHGAP10645 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.11□□□□□ -1.59
CHGAP10645 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
CHGAP10645 RNU1-72P-201ENST00000362976 153 ntBASIC5.11□□□□□ -1.59
CHGAP10645 RNU6-1209P-201ENST00000363655 107 ntBASIC5.11□□□□□ -1.59
CHGAP10645 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.11□□□□□ -1.59
CHGAP10645 UBE2DNL-203ENST00000474922 222 ntBASIC5.11□□□□□ -1.59
CHGAP10645 RPS29P21-201ENST00000496272 170 ntBASIC5.11□□□□□ -1.59
CHGAP10645 SCARNA17.1-201ENST00000516211 143 ntBASIC5.11□□□□□ -1.59
CHGAP10645 SCARNA17.2-201ENST00000516334 143 ntBASIC5.11□□□□□ -1.59
CHGAP10645 SCARNA11.3-201ENST00000517276 130 ntBASIC5.11□□□□□ -1.59
CHGAP10645 IGKV2-26-201ENST00000518305 343 ntBASIC5.11□□□□□ -1.59
CHGAP10645 AC011604.1-201ENST00000545978 196 ntBASIC5.11□□□□□ -1.59
CHGAP10645 AC090115.4-201ENST00000609970 188 ntBASIC5.11□□□□□ -1.59
CHGAP10645 SCARNA17.4-201ENST00000614296 143 ntBASIC5.11□□□□□ -1.59
CHGAP10645 AL121890.5-201ENST00000620848 304 ntBASIC5.11□□□□□ -1.59
CHGAP10645 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.11□□□□□ -1.59
CHGAP10645 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHGAP10645 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHGAP10645 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHGAP10645 SNORA14A-201ENST00000364773 135 ntBASIC5.1□□□□□ -1.59
CHGAP10645 Y_RNA.346-201ENST00000365385 112 ntBASIC5.1□□□□□ -1.59
CHGAP10645 MIR624-201ENST00000385217 97 ntBASIC5.1□□□□□ -1.59
CHGAP10645 RNA5SP104-201ENST00000410989 118 ntBASIC5.1□□□□□ -1.59
CHGAP10645 HMGN2P18-201ENST00000450680 270 ntBASIC5.1□□□□□ -1.59
CHGAP10645 AC093663.1-201ENST00000497190 394 ntBASIC5.1□□□□□ -1.59
CHGAP10645 MRPS36P2-201ENST00000512569 299 ntBASIC5.1□□□□□ -1.59
CHGAP10645 RNU7-149P-201ENST00000516739 59 ntBASIC5.1□□□□□ -1.59
CHGAP10645 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CHGAP10645 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC5.1□□□□□ -1.59
CHGAP10645 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHGAP10645 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHGAP10645 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.1□□□□□ -1.59
CHGAP10645 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CHGAP10645 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CHGAP10645 Y_RNA.35-201ENST00000362601 101 ntBASIC5.09□□□□□ -1.59
CHGAP10645 RNU6-309P-201ENST00000364573 106 ntBASIC5.09□□□□□ -1.59
CHGAP10645 RNA5SP127-201ENST00000411051 133 ntBASIC5.09□□□□□ -1.59
CHGAP10645 Y_RNA.651-201ENST00000459380 103 ntBASIC5.09□□□□□ -1.59
CHGAP10645 RN7SKP19-201ENST00000516016 252 ntBASIC5.09□□□□□ -1.59
CHGAP10645 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC5.09□□□□□ -1.59
CHGAP10645 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.09□□□□□ -1.59
CHGAP10645 MIR3117-201ENST00000584034 78 ntBASIC5.09□□□□□ -1.59
CHGAP10645 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.09□□□□□ -1.59
CHGAP10645 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CHGAP10645 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CHGAP10645 RNA5SP306-201ENST00000411087 107 ntBASIC5.08□□□□□ -1.6
CHGAP10645 MTATP6P21-201ENST00000440681 189 ntBASIC5.08□□□□□ -1.6
CHGAP10645 RN7SL504P-201ENST00000494496 287 ntBASIC5.08□□□□□ -1.6
CHGAP10645 JPX_2.1-201ENST00000614161 69 ntBASIC5.08□□□□□ -1.6
CHGAP10645 AC058791.1-201ENST00000608412 3198 ntBASIC5.08□□□□□ -1.6
CHGAP10645 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CHGAP10645 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CHGAP10645 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
CHGAP10645 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.08□□□□□ -1.6
CHGAP10645 AC091564.4-201ENST00000533934 2194 ntBASIC5.08□□□□□ -1.6
CHGAP10645 AC018555.1-201ENST00000567548 1980 ntBASIC5.07□□□□□ -1.6
CHGAP10645 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
CHGAP10645 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC5.07□□□□□ -1.6
CHGAP10645 MIRLET7F2-201ENST00000385277 83 ntBASIC5.07□□□□□ -1.6
CHGAP10645 MIR891A-201ENST00000401237 79 ntBASIC5.07□□□□□ -1.6
CHGAP10645 RNU6-168P-201ENST00000516189 101 ntBASIC5.07□□□□□ -1.6
CHGAP10645 MIR4474-201ENST00000579189 78 ntBASIC5.07□□□□□ -1.6
CHGAP10645 AL365205.2-201ENST00000594586 68 ntBASIC5.07□□□□□ -1.6
CHGAP10645 UCA1.1-201ENST00000620952 75 ntBASIC5.07□□□□□ -1.6
CHGAP10645 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
CHGAP10645 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.07□□□□□ -1.6
CHGAP10645 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHGAP10645 Y_RNA.52-201ENST00000362760 96 ntBASIC5.06□□□□□ -1.6
CHGAP10645 RNA5SP374-201ENST00000362939 125 ntBASIC5.06□□□□□ -1.6
CHGAP10645 RNU6-880P-201ENST00000384526 107 ntBASIC5.06□□□□□ -1.6
CHGAP10645 RNA5SP89-201ENST00000410300 108 ntBASIC5.06□□□□□ -1.6
CHGAP10645 HMGN2P7-201ENST00000456186 273 ntBASIC5.06□□□□□ -1.6
CHGAP10645 SNORA72.7-201ENST00000516349 94 ntBASIC5.06□□□□□ -1.6
CHGAP10645 RNU6-365P-201ENST00000517113 106 ntBASIC5.06□□□□□ -1.6
CHGAP10645 RNA5SP490-201ENST00000517141 136 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms