Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NDUFB4P4-201ENST00000404822 243 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 MIR1253-201ENST00000408273 105 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 MIR1251-201ENST00000408552 70 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFAP04085 AC123900.1-201ENST00000420390 96 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 MTCO1P44-201ENST00000441935 243 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 AC023449.1-201ENST00000454464 154 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 RNU6-1333P-201ENST00000516162 93 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 RNU7-172P-201ENST00000517125 64 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 PRELID2P1-201ENST00000552837 301 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 MIR378D2-201ENST00000580636 98 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFAP04085 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.49□□□□□ -1.85
PDGFAP04085 AL359881.1-201ENST00000602916 267 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFAP04085 AC011603.4-201ENST00000611325 277 ntBASIC3.49□□□□□ -1.85
PDGFAP04085 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFAP04085 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFAP04085 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFAP04085 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFAP04085 AC103988.1-201ENST00000566382 2177 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFAP04085 RNA5SP267-201ENST00000364893 126 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 RNU6-1180P-201ENST00000364935 107 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 RNU6-597P-201ENST00000365620 102 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 Y_RNA.432-201ENST00000384087 111 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 RNU6-136P-201ENST00000384663 107 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 MIR199A2-201ENST00000385289 110 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 RNU6-588P-201ENST00000410281 105 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 ATP5A1P2-201ENST00000412323 255 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 SNORA59A-201ENST00000459326 152 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 AC093259.1-201ENST00000509755 300 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 RNU6-197P-201ENST00000516680 100 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 AP001328.1-201ENST00000528550 176 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 AC005000.2-201ENST00000605468 310 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 AP001340.1-201ENST00000624405 217 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 MIR3651-201ENST00000630427 90 ntBASIC3.48□□□□□ -1.85
PDGFAP04085 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PDGFAP04085 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PDGFAP04085 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PDGFAP04085 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFAP04085 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PDGFAP04085 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PDGFAP04085 Y_RNA.81-201ENST00000362997 102 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 RNU1-23P-201ENST00000363361 144 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 Y_RNA.261-201ENST00000364631 102 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 Y_RNA.332-201ENST00000365271 113 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.47□□□□□ -1.85
PDGFAP04085 RNU6-460P-201ENST00000391158 108 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 AC002075.2-201ENST00000425207 252 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 AC025750.2-201ENST00000442609 450 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 RN7SL271P-201ENST00000487601 295 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 RNU6-1299P-201ENST00000516316 100 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 RNU6-856P-201ENST00000516959 98 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 AC090142.3-201ENST00000519012 385 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.47□□□□□ -1.85
PDGFAP04085 AL049861.1-201ENST00000603130 150 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
PDGFAP04085 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.47□□□□□ -1.85
PDGFAP04085 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.47□□□□□ -1.85
PDGFAP04085 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PDGFAP04085 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.47□□□□□ -1.85
PDGFAP04085 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
PDGFAP04085 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
PDGFAP04085 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFAP04085 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
PDGFAP04085 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PDGFAP04085 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PDGFAP04085 Y_RNA.203-201ENST00000364106 102 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 Y_RNA.273-201ENST00000364703 102 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 RNU6-80P-201ENST00000384195 107 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.46□□□□□ -1.86
PDGFAP04085 AC245047.4-201ENST00000433189 144 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.46□□□□□ -1.86
PDGFAP04085 AC115115.1-201ENST00000449927 248 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 RNU6-991P-201ENST00000516168 107 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 AL160236.1-201ENST00000556317 195 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFAP04085 AL929325.1-201ENST00000603096 117 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFAP04085 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFAP04085 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PDGFAP04085 IPO8P1-201ENST00000455509 3109 ntBASIC3.46□□□□□ -1.86
PDGFAP04085 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFAP04085 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
PDGFAP04085 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFAP04085 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDGFAP04085 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFAP04085 RPS4XP11-201ENST00000446897 772 ntBASIC3.45□□□□□ -1.86
PDGFAP04085 AP001486.1-201ENST00000463339 476 ntBASIC3.45□□□□□ -1.86
PDGFAP04085 RNU6-1146P-201ENST00000516282 102 ntBASIC3.45□□□□□ -1.86
PDGFAP04085 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
PDGFAP04085 U7.2-201ENST00000607576 63 ntBASIC3.45□□□□□ -1.86
PDGFAP04085 AL773545.4-201ENST00000637262 310 ntBASIC3.45□□□□□ -1.86
PDGFAP04085 AL513478.4-201ENST00000641636 310 ntBASIC3.45□□□□□ -1.86
PDGFAP04085 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDGFAP04085 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PDGFAP04085 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms