Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR298-201ENST00000401212 88 ntBASIC6.56□□□□□ -1.36
MSH5O43196 Y_RNA.606-201ENST00000410579 103 ntBASIC6.56□□□□□ -1.36
MSH5O43196 RNU2-63P-201ENST00000410792 194 ntBASIC6.56□□□□□ -1.36
MSH5O43196 RNU7-94P-201ENST00000459576 63 ntBASIC6.56□□□□□ -1.36
MSH5O43196 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC6.56□□□□□ -1.36
MSH5O43196 SNORA31.1-201ENST00000515993 133 ntBASIC6.56□□□□□ -1.36
MSH5O43196 SNORA31.5-201ENST00000516190 133 ntBASIC6.56□□□□□ -1.36
MSH5O43196 RNU6-1116P-201ENST00000517269 99 ntBASIC6.56□□□□□ -1.36
MSH5O43196 uc_338.7-201ENST00000621834 124 ntBASIC6.56□□□□□ -1.36
MSH5O43196 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MSH5O43196 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH5O43196 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSH5O43196 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH5O43196 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
MSH5O43196 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH5O43196 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH5O43196 RNU6-35P-201ENST00000384530 107 ntBASIC6.55□□□□□ -1.36
MSH5O43196 RN7SL814P-201ENST00000487715 300 ntBASIC6.55□□□□□ -1.36
MSH5O43196 RNU6-965P-201ENST00000516721 96 ntBASIC6.55□□□□□ -1.36
MSH5O43196 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
MSH5O43196 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MSH5O43196 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
MSH5O43196 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH5O43196 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
MSH5O43196 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH5O43196 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
MSH5O43196 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH5O43196 RNU6-163P-201ENST00000384396 106 ntBASIC6.54□□□□□ -1.36
MSH5O43196 RNA5SP482-201ENST00000391269 118 ntBASIC6.54□□□□□ -1.36
MSH5O43196 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.54□□□□□ -1.36
MSH5O43196 RPEP3-201ENST00000425462 676 ntBASIC6.54□□□□□ -1.36
MSH5O43196 RNU7-73P-201ENST00000458743 63 ntBASIC6.54□□□□□ -1.36
MSH5O43196 AC084357.1-201ENST00000473404 255 ntBASIC6.54□□□□□ -1.36
MSH5O43196 AL391358.1-201ENST00000605342 190 ntBASIC6.54□□□□□ -1.36
MSH5O43196 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC6.54□□□□□ -1.36
MSH5O43196 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH5O43196 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
MSH5O43196 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH5O43196 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MSH5O43196 RNA5SP323-201ENST00000391094 133 ntBASIC6.53□□□□□ -1.36
MSH5O43196 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC6.53□□□□□ -1.36
MSH5O43196 RNA5SP43-201ENST00000516559 110 ntBASIC6.53□□□□□ -1.36
MSH5O43196 AC133485.1-201ENST00000567176 124 ntBASIC6.53□□□□□ -1.36
MSH5O43196 MIR548AD-201ENST00000584780 82 ntBASIC6.53□□□□□ -1.36
MSH5O43196 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 AL162274.2-201ENST00000614406 332 ntBASIC6.53□□□□□ -1.36
MSH5O43196 AC068724.3-201ENST00000625906 87 ntBASIC6.53□□□□□ -1.36
MSH5O43196 MIR1248-201ENST00000629190 106 ntBASIC6.53□□□□□ -1.36
MSH5O43196 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH5O43196 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
MSH5O43196 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MSH5O43196 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.53□□□□□ -1.36
MSH5O43196 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
MSH5O43196 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.53□□□□□ -1.36
MSH5O43196 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSH5O43196 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MSH5O43196 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MSH5O43196 SNORD96B-201ENST00000386148 79 ntBASIC6.52□□□□□ -1.37
MSH5O43196 RNU6-930P-201ENST00000390938 100 ntBASIC6.52□□□□□ -1.37
MSH5O43196 RN7SKP220-201ENST00000410611 288 ntBASIC6.52□□□□□ -1.37
MSH5O43196 RNA5SP104-201ENST00000410989 118 ntBASIC6.52□□□□□ -1.37
MSH5O43196 AC004975.1-201ENST00000428733 208 ntBASIC6.52□□□□□ -1.37
MSH5O43196 RNA5SP360-201ENST00000516555 118 ntBASIC6.52□□□□□ -1.37
MSH5O43196 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.52□□□□□ -1.37
MSH5O43196 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MSH5O43196 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
MSH5O43196 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MSH5O43196 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.52□□□□□ -1.37
MSH5O43196 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MSH5O43196 AL022311.1-201ENST00000623726 19416 ntBASIC6.51□□□□□ -1.37
MSH5O43196 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
MSH5O43196 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
MSH5O43196 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.51□□□□□ -1.37
MSH5O43196 SNORD36A-201ENST00000362874 73 ntBASIC6.51□□□□□ -1.37
MSH5O43196 RPL23AP83-201ENST00000434984 473 ntBASIC6.51□□□□□ -1.37
MSH5O43196 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.51□□□□□ -1.37
MSH5O43196 RNU6-982P-201ENST00000516216 102 ntBASIC6.51□□□□□ -1.37
MSH5O43196 RNU6-1041P-201ENST00000516254 102 ntBASIC6.51□□□□□ -1.37
MSH5O43196 RNA5SP147-201ENST00000516493 109 ntBASIC6.51□□□□□ -1.37
MSH5O43196 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC6.51□□□□□ -1.37
MSH5O43196 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.51□□□□□ -1.37
MSH5O43196 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
MSH5O43196 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MSH5O43196 AC000123.3-201ENST00000624029 4975 ntBASIC6.51□□□□□ -1.37
MSH5O43196 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
MSH5O43196 SNORA24-201ENST00000384096 131 ntBASIC6.5□□□□□ -1.37
MSH5O43196 SNORA8-201ENST00000384574 139 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms