Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 Y_RNA.233-201ENST00000364407 101 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.235-201ENST00000364412 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 SNORD32B-201ENST00000364460 84 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.275-201ENST00000364726 110 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.306-201ENST00000365015 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.312-201ENST00000365089 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.322-201ENST00000365151 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 SNORA70B-201ENST00000384210 135 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 RNU6-281P-201ENST00000384212 103 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 RNU6-1274P-201ENST00000384557 107 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 SNORD2.1-201ENST00000458762 69 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.650-201ENST00000459002 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 AC008413.1-201ENST00000511864 177 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 RNU6-1278P-201ENST00000516130 107 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 RNA5SP148-201ENST00000516527 94 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.777-201ENST00000516982 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 HSPE1P18-201ENST00000517602 280 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 ZNF861P-201ENST00000588126 639 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.771-201ENST00000598668 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 AL162424.1-201ENST00000602325 221 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.789-201ENST00000622480 102 ntBASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC187A0A096LP49 AC092593.1-201ENST00000515413 1815 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 MIR26A1-201ENST00000362205 77 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 RNU6-1020P-201ENST00000363684 107 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.435-201ENST00000384095 112 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.446-201ENST00000384178 104 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 RNU6-804P-201ENST00000384286 107 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 Y_RNA.597-201ENST00000410463 100 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 CYP2C59P-201ENST00000457790 269 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AC090515.1-201ENST00000465295 476 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 YWHAEP4-201ENST00000505390 198 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 RNU2-31P-201ENST00000516954 155 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AK6P2-201ENST00000549020 471 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 MIR3144-201ENST00000579460 79 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 RPL17P51-201ENST00000605218 238 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 SNORD113-5-201ENST00000607261 78 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AC004832.4-201ENST00000608952 331 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AC005562.2-201ENST00000618264 111 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AL365265.1-201ENST00000621045 234 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC187A0A096LP49 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC187A0A096LP49 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
CCDC187A0A096LP49 RNA5SP361-201ENST00000362686 118 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC187A0A096LP49 SNORA12-201ENST00000391162 147 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 RNU4-30P-201ENST00000410245 143 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 RNU6-1135P-201ENST00000411083 103 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.58□□□□□ -2
CCDC187A0A096LP49 AC091021.1-201ENST00000468051 388 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 MRPS18CP4-201ENST00000535821 231 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.58□□□□□ -2
CCDC187A0A096LP49 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC187A0A096LP49 Y_RNA.570-201ENST00000384750 101 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 MIR95-201ENST00000385072 81 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 MIR549A-201ENST00000385268 96 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 RNU2-63P-201ENST00000410792 194 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 AC027124.2-201ENST00000428249 105 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 AL161788.1-201ENST00000441805 169 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
CCDC187A0A096LP49 Y_RNA.638-201ENST00000459374 113 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 AP004217.1-201ENST00000480579 346 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 CKS1BP2-201ENST00000497342 240 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 Y_RNA.662-201ENST00000516028 97 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 RNA5SP24-201ENST00000516478 95 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 RN7SKP49-201ENST00000516675 260 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC187A0A096LP49 AC018630.3-201ENST00000542637 96 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 MIR548AI-201ENST00000579940 88 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 MIR4308-201ENST00000580634 81 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 AC010999.1-201ENST00000611856 324 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 TCL6_2.1-201ENST00000615162 119 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 AC064859.1-201ENST00000624741 174 ntBASIC2.57□□□□□ -2
CCDC187A0A096LP49 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC187A0A096LP49 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC187A0A096LP49 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.57□□□□□ -2
CCDC187A0A096LP49 RNA5SP432-201ENST00000362480 116 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 RNU1-62P-201ENST00000362599 164 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 Y_RNA.136-201ENST00000363444 102 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 SNORA18.2-201ENST00000383865 132 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 Y_RNA.398-201ENST00000383952 99 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 Y_RNA.418-201ENST00000384029 102 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 RNU6-926P-201ENST00000384075 107 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 Y_RNA.441-201ENST00000384123 112 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 Y_RNA.569-201ENST00000384749 103 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 MIR329-1-201ENST00000385028 80 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 SNORA53-201ENST00000391141 249 ntBASIC2.56□□□□□ -2
CCDC187A0A096LP49 AL033519.2-201ENST00000403958 392 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms