Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 AC007012.1-201ENST00000567192 175 ntBASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 MIR6868-201ENST00000611215 58 ntBASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 MIR486-1-201ENST00000612171 68 ntBASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 AL136360.1-201ENST00000503377 1900 ntBASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HRH3Q9Y5N1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 RNU6-1292P-201ENST00000383856 107 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 MIR554-201ENST00000384874 96 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 MIR670-201ENST00000390142 98 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 AC016909.1-201ENST00000415916 166 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 RNU7-170P-201ENST00000459303 61 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 AC096725.1-201ENST00000514266 313 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 AC007751.1-201ENST00000529260 376 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 AL606490.9-201ENST00000603331 271 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 U6.73-201ENST00000619194 103 ntBASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HRH3Q9Y5N1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 MIR570-201ENST00000384917 97 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 SNORD12C-201ENST00000386307 89 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 AL031121.1-201ENST00000406553 254 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 DBIP2-201ENST00000419076 262 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 HMGN2P18-201ENST00000450680 270 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 AL133162.1-201ENST00000463228 453 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 RAC1P2-201ENST00000511164 579 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 RNU6-1096P-201ENST00000517089 102 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 RNA5SP490-201ENST00000517141 136 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 AC107294.3-201ENST00000609211 526 ntBASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.69□□□□□ -1.82
HRH3Q9Y5N1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 RNA5SP295-201ENST00000362655 121 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 Y_RNA.66-201ENST00000362862 102 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 SNORD35B-201ENST00000363660 87 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 RNU6-1113P-201ENST00000384348 107 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 RNU6-554P-201ENST00000410466 106 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 GOT2P5-201ENST00000433995 546 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 AC093663.1-201ENST00000497190 394 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 MIR7702-201ENST00000621931 59 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 MIR6500-201ENST00000622700 86 ntBASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HRH3Q9Y5N1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 RNU6-766P-201ENST00000362478 107 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 Y_RNA.85-201ENST00000363014 111 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 SNORA62.3-201ENST00000365110 153 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 SNORD6-201ENST00000365444 73 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 RNU6-756P-201ENST00000383997 107 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 PTMAP2-201ENST00000397627 327 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 AP000567.1-201ENST00000406413 156 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 AL513477.1-202ENST00000417061 214 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 RPS15AP28-201ENST00000435088 386 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 AL500522.2-201ENST00000448562 343 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 SNRPGP3-201ENST00000469405 227 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 RNU6-1146P-201ENST00000516282 102 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 RNU6-965P-201ENST00000516721 96 ntBASIC3.67□□□□□ -1.82
HRH3Q9Y5N1 Y_RNA.714-201ENST00000517065 90 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms