Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FTH1P12-201ENST00000432137 551 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 RPS15AP28-201ENST00000435088 386 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 AC025750.2-201ENST00000442609 450 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 RPS26P15-201ENST00000488067 348 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.659-201ENST00000515994 113 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORA18.7-201ENST00000516910 131 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 MIR3939-201ENST00000582614 106 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 MIR6076-201ENST00000617521 113 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORD116-10-201ENST00000363791 102 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 RNU4-16P-201ENST00000364737 141 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.467-201ENST00000384297 102 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 RNU6-1274P-201ENST00000384557 107 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.547-201ENST00000384654 119 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 Z98742.2-201ENST00000431564 187 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 RPL32P34-201ENST00000486380 400 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 RN7SKP57-201ENST00000517248 293 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 AL358944.1-201ENST00000528537 144 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 AC091544.4-201ENST00000555268 342 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 HSPE1P19-201ENST00000603327 295 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 AL513534.2-201ENST00000603836 250 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 MIR548BB-201ENST00000626714 66 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHGA4Q9Y5G9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHGA4Q9Y5G9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHGA4Q9Y5G9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.46□□□□□ -1.69
PCDHGA4Q9Y5G9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU1-83P-201ENST00000363426 164 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-442P-201ENST00000383968 104 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 MIR522-201ENST00000385071 87 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-1186P-201ENST00000410429 97 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 AL353813.1-201ENST00000440700 253 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 SNRPGP3-201ENST00000469405 227 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-1006P-201ENST00000516998 103 ntBASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PCDHGA4Q9Y5G9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-679P-201ENST00000391003 106 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 Z98941.1-201ENST00000407764 100 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU2-40P-201ENST00000410833 196 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU7-170P-201ENST00000459303 61 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 RPL30P14-201ENST00000482744 348 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 AC015795.1-201ENST00000513669 327 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 AC007224.1-201ENST00000564410 144 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 U2.20-201ENST00000613956 192 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA4Q9Y5G9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 Y_RNA.94-201ENST00000363068 106 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-509P-201ENST00000363519 107 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 Y_RNA.316-201ENST00000365118 111 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 MIR23A-201ENST00000385245 73 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 SNORA48.7-201ENST00000391302 135 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 SNORA7.5-201ENST00000410672 110 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AL159169.1-201ENST00000421119 127 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AP001486.1-201ENST00000463339 476 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AP000873.1-201ENST00000463987 400 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 RAC1P2-201ENST00000511164 579 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU1-61P-201ENST00000516107 151 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU7-99P-201ENST00000516271 62 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 RNU6-341P-201ENST00000516973 96 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AP003484.1-201ENST00000530974 250 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AP000867.2-201ENST00000532468 320 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AC004812.1-201ENST00000540773 146 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AL360157.1-201ENST00000565962 87 ntBASIC4.44□□□□□ -1.7
PCDHGA4Q9Y5G9 AC015912.2-201ENST00000571053 181 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms