Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.15-201ENST00000611544 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.16-201ENST00000613119 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.12-201ENST00000613778 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.9-201ENST00000615427 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 AL078604.3-201ENST00000615580 211 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.11-201ENST00000616345 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.2-201ENST00000616535 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.3-201ENST00000617785 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.19-201ENST00000618602 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 RNU2-1-201ENST00000618664 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.6-201ENST00000619225 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.5-201ENST00000619465 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U2.10-201ENST00000620268 191 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 AC110079.1-202ENST00000635213 138 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 U6.115-201ENST00000636045 103 ntBASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.34□□□□□ -1.87
PCDHB12Q9Y5F1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.34□□□□□ -1.88
PCDHB12Q9Y5F1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 MIR22-201ENST00000362190 85 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 Y_RNA.7-201ENST00000362352 102 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 RNU5F-4P-201ENST00000516581 114 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 AC100767.1-201ENST00000528178 123 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 MIR4672-201ENST00000583126 81 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 UCA1.1-201ENST00000620952 75 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 AC132825.6-201ENST00000638861 357 ntBASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHB12Q9Y5F1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 AC010329.5-201ENST00000623497 2174 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 Y_RNA.238-201ENST00000364441 102 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 Y_RNA.441-201ENST00000384123 112 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 SNORA54-201ENST00000384281 123 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 MIR586-201ENST00000385035 97 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 RNU6-710P-201ENST00000410424 105 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 TMSB4XP3-201ENST00000445144 114 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 SRIP1-201ENST00000489235 288 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 MIR449C-201ENST00000516047 92 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 ELOCP29-201ENST00000588193 334 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 AC107294.3-201ENST00000609211 526 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 AC108706.1-201ENST00000611053 297 ntBASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHB12Q9Y5F1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 RNU6-1048P-201ENST00000364054 107 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 AL031121.1-201ENST00000406553 254 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 AL139281.1-201ENST00000422120 335 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 HMGN2P9-201ENST00000476875 229 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 RNU1-143P-201ENST00000516296 146 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 RN7SKP282-201ENST00000516824 299 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 GTF3AP2-201ENST00000557014 266 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 U1.23-201ENST00000610293 146 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 RNU1-68P-201ENST00000615382 146 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 AC013791.1-201ENST00000616619 62 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 U1.39-201ENST00000621562 146 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 AC134026.1-201ENST00000623249 2239 ntBASIC3.31□□□□□ -1.88
PCDHB12Q9Y5F1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 RNU6-486P-201ENST00000363116 107 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 Y_RNA.287-201ENST00000364853 94 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 SNORA51.4-201ENST00000364993 124 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 Y_RNA.361-201ENST00000365515 120 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 Y_RNA.412-201ENST00000384001 104 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 SNORA72.4-201ENST00000384174 132 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 RNU6-855P-201ENST00000410395 104 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 RNA5SP356-201ENST00000515972 94 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 RNA5SP367-201ENST00000516557 118 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 AC068700.1-201ENST00000565862 3754 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 AC092435.3-201ENST00000565538 3654 ntBASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHB12Q9Y5F1 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms