Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 HMGN2P9-201ENST00000476875 229 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 YWHAEP4-201ENST00000505390 198 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 RNA5SP112-201ENST00000515937 99 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 AC103810.1-201ENST00000579873 453 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 MIR4431-201ENST00000579990 94 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 RPL30P11-203ENST00000598995 310 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 AL670379.2-201ENST00000604983 252 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 MIR486-1-201ENST00000612171 68 ntBASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SIT1Q9Y3P8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RNU6-1305P-201ENST00000364353 104 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 SNORA51.4-201ENST00000364993 124 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RNU6-1083P-201ENST00000384022 107 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.488-201ENST00000384403 102 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RNU6-1117P-201ENST00000384525 104 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RNU6-578P-201ENST00000390980 103 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 MIR300-201ENST00000401138 83 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RNU6-855P-201ENST00000410395 104 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 AL162725.1-201ENST00000435405 301 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RPS4XP2-201ENST00000458402 793 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RN7SL93P-201ENST00000463035 293 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RPS26P15-201ENST00000488067 348 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RPS27P26-201ENST00000494583 239 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.797-201ENST00000515977 94 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 MIR2114-201ENST00000516645 80 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RNU6-1098P-201ENST00000516772 96 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 AC091544.4-201ENST00000555268 342 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 AC025754.2-201ENST00000606491 432 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 Y_RNA.802-201ENST00000614892 130 ntBASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SIT1Q9Y3P8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SIT1Q9Y3P8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SIT1Q9Y3P8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 Y_RNA.215-201ENST00000364204 112 ntBASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 snoU2_19.4-201ENST00000364329 80 ntBASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 Y_RNA.497-201ENST00000384447 98 ntBASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 MIR4765-201ENST00000585007 77 ntBASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 AC069294.1-201ENST00000608397 350 ntBASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 AL391903.3-201ENST00000612158 163 ntBASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 Y_RNA.778-201ENST00000620203 90 ntBASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
SIT1Q9Y3P8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 RNU6-486P-201ENST00000363116 107 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 RNU6-144P-201ENST00000383951 107 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 MIR616-201ENST00000385293 97 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 RNU6-131P-201ENST00000391144 107 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 RNA5SP354-201ENST00000391247 136 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 CR769767.1-201ENST00000436337 346 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 HSPE1P13-201ENST00000451143 297 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 SCARNA11.3-201ENST00000517276 130 ntBASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.07□□□□□ -1.92
SIT1Q9Y3P8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 AC009487.4-201ENST00000624969 3585 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 RNU6-1048P-201ENST00000364054 107 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 SNORD6-201ENST00000365444 73 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 RNU6-959P-201ENST00000384671 107 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 RNU6-376P-201ENST00000384731 106 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 MIR196B-201ENST00000384852 84 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 MIR1283-1-201ENST00000408494 87 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 AL159169.1-201ENST00000421119 127 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 AC009414.1-201ENST00000427200 443 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 MICF-203ENST00000432679 129 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 AC087499.2-201ENST00000432861 149 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 RNU7-141P-201ENST00000459304 62 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 RNU5F-4P-201ENST00000516581 114 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 AC018630.3-201ENST00000542637 96 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 AC107016.2-201ENST00000547968 190 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 MIR5047-201ENST00000579212 100 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 FAM35DP-201ENST00000323387 2712 ntBASIC3.06□□□□□ -1.92
SIT1Q9Y3P8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms