Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NOD1Q9Y239 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NOD1Q9Y239 RNU1-72P-201ENST00000362976 153 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 SNORD74.4-201ENST00000364129 80 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 RNU4-41P-201ENST00000364426 143 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 RNU6-418P-201ENST00000384035 107 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 MIR181A2-201ENST00000384863 110 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 RNA5SP306-201ENST00000411087 107 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 AL353705.1-201ENST00000433468 480 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.92□□□□□ -1.78
NOD1Q9Y239 SNORA59A-201ENST00000459326 152 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 AC025445.1-201ENST00000502728 300 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 AC025647.1-201ENST00000517879 253 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 AC013412.1-201ENST00000610687 192 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 AC002064.3-201ENST00000623448 346 ntBASIC3.92□□□□□ -1.78
NOD1Q9Y239 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NOD1Q9Y239 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NOD1Q9Y239 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NOD1Q9Y239 RNY1P11-201ENST00000363759 113 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 RNU6-674P-201ENST00000363831 107 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 RNU4-13P-201ENST00000364019 141 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 SNORD17-201ENST00000390930 237 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 RNA5SP496-201ENST00000391240 109 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 AL512604.1-201ENST00000404812 257 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 RNA5SP511-201ENST00000410487 115 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 CYCSP49-201ENST00000420810 319 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 AL035461.1-201ENST00000421490 332 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.91□□□□□ -1.78
NOD1Q9Y239 RNU6-919P-201ENST00000516731 104 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.91□□□□□ -1.78
NOD1Q9Y239 AC093732.2-201ENST00000607950 274 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.91□□□□□ -1.78
NOD1Q9Y239 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NOD1Q9Y239 SCARNA15.3-201ENST00000626315 122 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 SCARNA4.1-201ENST00000628597 123 ntBASIC3.91□□□□□ -1.78
NOD1Q9Y239 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NOD1Q9Y239 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.91□□□□□ -1.78
NOD1Q9Y239 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.9□□□□□ -1.78
NOD1Q9Y239 AC110774.1-201ENST00000623567 2018 ntBASIC3.9□□□□□ -1.78
NOD1Q9Y239 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NOD1Q9Y239 CENPCP1-201ENST00000533085 2578 ntBASIC3.9□□□□□ -1.78
NOD1Q9Y239 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.9□□□□□ -1.78
NOD1Q9Y239 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NOD1Q9Y239 RNU6-438P-201ENST00000365561 103 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 RNU6-44P-201ENST00000384045 107 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 MIR93-201ENST00000385024 80 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 RNU1-101P-201ENST00000391171 127 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 RN7SKP101-201ENST00000411376 320 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 AC010154.1-201ENST00000425857 269 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 AC115115.1-201ENST00000449927 248 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 AC016925.1-201ENST00000458303 298 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 AC080013.2-201ENST00000460866 323 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 AC010531.2-201ENST00000465012 153 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 RN7SKP209-201ENST00000516888 304 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 SCARNA11.3-201ENST00000517276 130 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 MIR378D2-201ENST00000580636 98 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 U7.2-201ENST00000607576 63 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 XIST_intron.1-201ENST00000619444 68 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 AC006435.5-201ENST00000624486 112 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 U6.98-201ENST00000637157 84 ntBASIC3.9□□□□□ -1.79
NOD1Q9Y239 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
NOD1Q9Y239 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NOD1Q9Y239 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NOD1Q9Y239 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.89□□□□□ -1.79
NOD1Q9Y239 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NOD1Q9Y239 Y_RNA.251-201ENST00000364551 99 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 RNU6-1325P-201ENST00000364905 105 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 RNU6-1235P-201ENST00000384559 107 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 AC008134.1-201ENST00000420943 193 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 RNU6-498P-201ENST00000459468 107 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.89□□□□□ -1.79
NOD1Q9Y239 RNU6-965P-201ENST00000516721 96 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 AC093331.1-201ENST00000521474 169 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 AC018630.3-201ENST00000542637 96 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NOD1Q9Y239 AC015720.1-201ENST00000565251 277 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NOD1Q9Y239 MIR8057-201ENST00000620957 69 ntBASIC3.89□□□□□ -1.79
NOD1Q9Y239 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NOD1Q9Y239 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.89□□□□□ -1.79
NOD1Q9Y239 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NOD1Q9Y239 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NOD1Q9Y239 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.89□□□□□ -1.79
NOD1Q9Y239 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.89□□□□□ -1.79
NOD1Q9Y239 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NOD1Q9Y239 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NOD1Q9Y239 AC093010.3-201ENST00000570269 15214 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 AC009487.4-201ENST00000624969 3585 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 RNU6-1082P-201ENST00000364574 107 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 RNU6-597P-201ENST00000365620 102 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 RPL30P4-201ENST00000429309 333 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 AC006028.1-201ENST00000438379 402 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 RPS27P22-201ENST00000478056 241 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 RNU6-659P-201ENST00000516454 104 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 AC090142.3-201ENST00000519012 385 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 MIR4644-201ENST00000579929 84 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 AC120024.3-201ENST00000603167 156 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NOD1Q9Y239 AC091152.2-201ENST00000591628 2569 ntBASIC3.88□□□□□ -1.79
NOD1Q9Y239 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms