Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 AL121890.1-201ENST00000435457 205 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 HMGN2P9-201ENST00000476875 229 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 FCF1P8-201ENST00000510322 597 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 RNU6-1098P-201ENST00000516772 96 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 Y_RNA.757-201ENST00000578934 114 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 POLR3GP1-201ENST00000594073 261 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 AC120024.3-201ENST00000603167 156 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 Z83843.1-201ENST00000604070 3685 ntBASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.32□□□□□ -1.72
ZC3H4Q9UPT8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 Y_RNA.251-201ENST00000364551 99 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 RNU6-1336P-201ENST00000383886 109 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 RNU6-1144P-201ENST00000384247 104 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 SNORD14D-201ENST00000384390 87 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 RNU4-43P-201ENST00000410628 137 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 RNU4-47P-201ENST00000410876 114 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 AC080013.2-201ENST00000460866 323 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 AC013412.1-201ENST00000610687 192 ntBASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZC3H4Q9UPT8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AL355596.1-201ENST00000565399 3996 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 MIR423-201ENST00000362201 94 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 SNORA20B-201ENST00000384220 132 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 MIR767-201ENST00000390228 109 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AL355796.1-201ENST00000406706 323 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 RNA5SP208-201ENST00000516156 78 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AC127455.1-201ENST00000565496 145 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 MIR378D2-201ENST00000580636 98 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AC107294.3-201ENST00000609211 526 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AC010733.2-201ENST00000589496 5702 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 CENPCP1-201ENST00000533085 2578 ntBASIC4.3□□□□□ -1.72
ZC3H4Q9UPT8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 RNU4-41P-201ENST00000364426 143 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 RNU5E-3P-201ENST00000515913 68 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 MIR449C-201ENST00000516047 92 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 AC093331.1-201ENST00000521474 169 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 MIR4753-201ENST00000585119 83 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 AP003357.1-201ENST00000604497 148 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 RPL17P51-201ENST00000605218 238 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 MFSD8-233ENST00000641482 4860 ntBASIC4.29□□□□□ -1.72
ZC3H4Q9UPT8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 AP001486.2-201ENST00000561652 5113 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 SNORA25.7-201ENST00000364375 127 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 CD24P4-201ENST00000382840 243 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 AL138878.1-201ENST00000405131 347 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 RHEBP3-201ENST00000411920 351 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 AL158823.1-201ENST00000418441 478 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 DBIP2-201ENST00000419076 262 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 Z98742.2-201ENST00000431564 187 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 RNU6-437P-201ENST00000459408 95 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 RNU7-57P-201ENST00000459540 60 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 RNU6-772P-201ENST00000516042 105 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 Y_RNA.709-201ENST00000516952 92 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 AC008739.2-201ENST00000597006 317 ntBASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.28□□□□□ -1.72
ZC3H4Q9UPT8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AC010680.1-201ENST00000590024 3590 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AL356292.1-201ENST00000283110 373 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 RNU6-271P-201ENST00000363858 105 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 SNORA22-201ENST00000383907 134 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AC245047.4-201ENST00000433189 144 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AC006483.1-201ENST00000487308 313 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 Y_RNA.712-201ENST00000517011 92 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AC023043.3-201ENST00000593113 385 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 AL033523.1-201ENST00000605153 153 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 UBE3AP2-201ENST00000429033 2259 ntBASIC4.27□□□□□ -1.73
ZC3H4Q9UPT8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms