Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-965P-201ENST00000516721 96 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 MIR4435-1-201ENST00000582552 80 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 MTND5P35-201ENST00000557537 1720 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.143-201ENST00000363520 106 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.144-201ENST00000363521 113 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-245P-201ENST00000384020 107 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-301P-201ENST00000384277 107 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.574-201ENST00000384766 95 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 AL033519.2-201ENST00000403958 392 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 AC080013.2-201ENST00000460866 323 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 AC025033.1-201ENST00000463883 194 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 AC008413.1-201ENST00000511864 177 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 SNRPGP19-201ENST00000603826 189 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 TCL6_2.1-201ENST00000615162 119 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 MIR5739-201ENST00000619803 80 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 AC131280.1-202ENST00000624067 4211 ntBASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
SMARCAL1Q9NZC9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.149-201ENST00000363558 117 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.176-201ENST00000363815 109 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-961P-201ENST00000363893 105 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-770P-201ENST00000363929 105 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.439-201ENST00000384119 94 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-793P-201ENST00000384233 104 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 AL355497.1-201ENST00000406262 551 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 MIR320B2-201ENST00000408479 138 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.595-201ENST00000410403 105 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 PCNPP5-201ENST00000452246 481 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 CKS1BP2-201ENST00000497342 240 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 SNORA40.9-201ENST00000515895 93 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.683-201ENST00000516508 93 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-1098P-201ENST00000516772 96 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 SNORA40.15-201ENST00000516884 107 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 AC026470.2-201ENST00000561492 181 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 MIR4503-201ENST00000582187 83 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 AC002984.1-201ENST00000591692 448 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 PRR13P7-201ENST00000605538 430 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 MIR6840-201ENST00000611937 71 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 AC010205.1-201ENST00000616668 449 ntBASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.19-201ENST00000362462 99 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNU1-23P-201ENST00000363361 144 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNA5SP125-201ENST00000364843 120 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 SNORD87-201ENST00000364849 89 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-611P-201ENST00000384276 104 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-196P-201ENST00000384315 107 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 SNORD23.1-201ENST00000408212 104 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 MIR1294-201ENST00000408503 142 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-121P-201ENST00000410525 99 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 AL139156.1-201ENST00000412785 841 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 AL161788.1-201ENST00000441805 169 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 IPO7P1-201ENST00000442031 636 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RPL26P26-201ENST00000480251 434 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 AC098869.1-201ENST00000481627 292 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-408P-201ENST00000515910 100 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNU1-117P-201ENST00000517041 158 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 AC136932.1-201ENST00000574771 208 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 SNORD53-201ENST00000579969 78 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.772-201ENST00000606692 102 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 7SK.10-201ENST00000621414 298 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SMARCAL1Q9NZC9 RNU1-62P-201ENST00000362599 164 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 Y_RNA.183-201ENST00000363882 113 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-937P-201ENST00000384325 106 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RNU6-463P-201ENST00000384340 107 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 MRPL35P1-201ENST00000404272 572 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RNA5SP508-201ENST00000411327 119 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 UQCRBP2-201ENST00000447827 297 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 AC007395.1-201ENST00000451333 677 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 LINC01399-202ENST00000458450 244 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RN7SL429P-201ENST00000479090 223 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RN7SL489P-201ENST00000486185 223 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RN7SL327P-201ENST00000488659 223 ntBASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.18□□□□□ -2.06
SMARCAL1Q9NZC9 RNU5F-4P-201ENST00000516581 114 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms