Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RNU6-659P-201ENST00000516454 104 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-197P-201ENST00000516680 100 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 MIR3944-201ENST00000581277 108 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-136P-201ENST00000384663 107 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 RNU2-52P-201ENST00000410680 190 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 RPS12P18-201ENST00000442381 270 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 AL133162.1-201ENST00000463228 453 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 RNA5SP76-201ENST00000516277 87 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-1299P-201ENST00000516316 100 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 SNORD59.2-201ENST00000516873 68 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 AC018630.3-201ENST00000542637 96 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 AC090049.2-201ENST00000550377 109 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 AC015720.1-201ENST00000565251 277 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 Y_RNA.757-201ENST00000578934 114 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 RNVU1-4-201ENST00000612985 164 ntBASIC3.44□□□□□ -1.86
BHLHE41Q9C0J9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 RNY1P11-201ENST00000363759 113 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 RNA5SP139-201ENST00000364340 117 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 SNORA25.7-201ENST00000364375 127 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 Y_RNA.251-201ENST00000364551 99 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 SNORA72-201ENST00000384339 132 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 MIR218-1-201ENST00000384999 110 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 RNU2-55P-201ENST00000411146 174 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 AL139247.1-201ENST00000422768 325 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 RPL30P4-201ENST00000429309 333 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 ARF4P2-201ENST00000430209 526 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 RAC1P5-201ENST00000512182 576 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 RNU2-34P-201ENST00000516534 121 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 RNA5SP490-201ENST00000517141 136 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 MIR5685-201ENST00000579080 79 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 AC093732.2-201ENST00000607950 274 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 U7.8-201ENST00000619968 63 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 AC002064.3-201ENST00000623448 346 ntBASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
BHLHE41Q9C0J9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 AC058791.1-201ENST00000608412 3198 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 RNU1-72P-201ENST00000362976 153 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 SNORA11.1-201ENST00000408133 129 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 RNU7-107P-201ENST00000459121 61 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 AC090515.1-201ENST00000465295 476 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 RPS29P21-201ENST00000496272 170 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 RNU2-27P-201ENST00000516185 142 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 MIR5047-201ENST00000579212 100 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 AL021707.8-201ENST00000609428 183 ntBASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.42□□□□□ -1.86
BHLHE41Q9C0J9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 PWAR6-201ENST00000552334 4618 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-117P-201ENST00000365415 107 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 SNORA70.4-201ENST00000365509 134 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 HMGN2P18-201ENST00000450680 270 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 CKS1BP2-201ENST00000497342 240 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 MIR2681-201ENST00000581814 105 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 MIR7157-201ENST00000635801 60 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 AC068647.1-201ENST00000489539 2265 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 AL391516.1-201ENST00000554380 2449 ntBASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BHLHE41Q9C0J9 AP003122.5-201ENST00000527668 3766 ntBASIC3.4□□□□□ -1.86
BHLHE41Q9C0J9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
BHLHE41Q9C0J9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-1336P-201ENST00000383886 109 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 MIR449B-201ENST00000384995 97 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 RNU1-101P-201ENST00000391171 127 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 RN7SKP156-201ENST00000410308 342 ntBASIC3.4□□□□□ -1.87
BHLHE41Q9C0J9 RNU6-1064P-201ENST00000410626 104 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms