Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.23□□□□□ -1.89
HDAC8Q9BY41 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
HDAC8Q9BY41 MIR548AY-201ENST00000617669 107 ntBASIC3.23□□□□□ -1.89
HDAC8Q9BY41 XIST_intron.1-201ENST00000619444 68 ntBASIC3.23□□□□□ -1.89
HDAC8Q9BY41 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HDAC8Q9BY41 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HDAC8Q9BY41 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC8Q9BY41 AC010332.2-201ENST00000613083 1904 ntBASIC3.23□□□□□ -1.89
HDAC8Q9BY41 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.23□□□□□ -1.89
HDAC8Q9BY41 AL159152.1-201ENST00000635019 2587 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 SNORA7.4-201ENST00000384249 137 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 MIR518C-201ENST00000384822 101 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 SNORA40-201ENST00000388090 126 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 Z92545.1-201ENST00000411782 234 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AC006461.1-201ENST00000412637 326 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AC009414.1-201ENST00000427200 443 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 CST9LP2-201ENST00000437612 320 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AL121914.1-201ENST00000450188 156 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 RNU7-57P-201ENST00000459540 60 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 RPL27AP5-201ENST00000469428 449 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AC083906.5-201ENST00000503722 328 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 MIR449C-201ENST00000516047 92 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 RNA5SP272-201ENST00000516095 111 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 SNORA25.12-201ENST00000516202 82 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 RNVU1-4-201ENST00000612985 164 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AC068647.2-201ENST00000637380 353 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 AC100821.1-201ENST00000523153 2479 ntBASIC3.22□□□□□ -1.89
HDAC8Q9BY41 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HDAC8Q9BY41 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 RNU6-199P-201ENST00000362954 107 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 RNU6-1290P-201ENST00000362957 109 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 RNU6-271P-201ENST00000363858 105 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 Y_RNA.229-201ENST00000364347 113 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 SNORA48.2-201ENST00000390926 124 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 AL121890.1-201ENST00000435457 205 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 HSPE1P13-201ENST00000451143 297 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.21□□□□□ -1.9
HDAC8Q9BY41 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
HDAC8Q9BY41 snoZ196.1-201ENST00000625269 89 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 MIR3658-201ENST00000636291 56 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HDAC8Q9BY41 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.9
HDAC8Q9BY41 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HDAC8Q9BY41 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
HDAC8Q9BY41 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HDAC8Q9BY41 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
HDAC8Q9BY41 AP003122.5-201ENST00000527668 3766 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 Y_RNA.172-201ENST00000363765 102 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU6-234P-201ENST00000365229 104 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU6-643P-201ENST00000384018 107 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 SNORA20B-201ENST00000384220 132 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU6-1274P-201ENST00000384557 107 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 SNORA22C-201ENST00000384614 134 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 MIR15B-201ENST00000385045 98 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU6-1168P-201ENST00000390831 104 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU6-1228P-201ENST00000391014 107 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 AL355796.1-201ENST00000406706 323 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU6-735P-201ENST00000410612 107 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 AC117454.1-201ENST00000491120 168 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 MRPS36P2-201ENST00000512569 299 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU7-115P-201ENST00000516433 55 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 RNU6-1337P-201ENST00000516525 95 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.2□□□□□ -1.9
HDAC8Q9BY41 AC093331.1-201ENST00000521474 169 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 MIR4425-201ENST00000580572 84 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 UCA1.1-201ENST00000620952 75 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
HDAC8Q9BY41 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.2□□□□□ -1.9
HDAC8Q9BY41 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC8Q9BY41 U8.7-201ENST00000364940 136 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 RNU6-728P-201ENST00000365375 104 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 MIR128-1-201ENST00000384921 82 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 MT-TT-201ENST00000387460 66 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AL606845.1-201ENST00000404881 255 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC8Q9BY41 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AC008267.6-201ENST00000441664 139 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AL137159.1-201ENST00000452808 512 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 S100A11P2-201ENST00000467589 312 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 SCARNA17.1-201ENST00000516211 143 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 SCARNA17.2-201ENST00000516334 143 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AC109329.2-201ENST00000519658 482 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC8Q9BY41 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 SCARNA17.4-201ENST00000614296 143 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AL365222.1-201ENST00000614661 98 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.19□□□□□ -1.9
HDAC8Q9BY41 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms