Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 SNORA67.2-201ENST00000384300 149 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 U6atac.2-201ENST00000408644 118 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 U3.40-201ENST00000408706 208 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 OOSP1P1-201ENST00000423265 274 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 AL392103.1-201ENST00000447000 198 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 MIR4308-201ENST00000580634 81 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 MIR3199-1-201ENST00000582434 88 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 AL365265.1-201ENST00000621045 234 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 SNORA50A-202ENST00000629536 136 ntBASIC2.82□□□□□ -1.96
NDC1Q9BTX1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NDC1Q9BTX1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NDC1Q9BTX1 RNU6-1272P-201ENST00000362776 107 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.262-201ENST00000364641 102 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.304-201ENST00000365011 112 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 SNORA9.2-201ENST00000365361 133 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 MIR218-1-201ENST00000384999 110 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 RNU6-1248P-201ENST00000391096 64 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NDC1Q9BTX1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.81□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.662-201ENST00000516028 97 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 AP005660.1-201ENST00000522972 293 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 MIR3133-201ENST00000583157 78 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 AL133393.1-201ENST00000603277 287 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 AL008718.3-201ENST00000610217 321 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 AC007318.2-201ENST00000620999 243 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 U6.106-201ENST00000636360 105 ntBASIC2.81□□□□□ -1.96
NDC1Q9BTX1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
NDC1Q9BTX1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NDC1Q9BTX1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.81□□□□□ -1.96
NDC1Q9BTX1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 RNU6-187P-201ENST00000384139 106 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 MIR1294-201ENST00000408503 142 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 BTF3P11-201ENST00000426582 477 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 RNU6-789P-201ENST00000517105 102 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 RNU6-586P-201ENST00000517265 104 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 AC105245.1-201ENST00000581934 244 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 AL713866.2-201ENST00000603579 219 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 AC069294.1-201ENST00000608397 350 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.8□□□□□ -1.96
NDC1Q9BTX1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.8□□□□□ -1.96
NDC1Q9BTX1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RNU1-72P-201ENST00000362976 153 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RNU6-653P-201ENST00000363074 106 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.240-201ENST00000364469 95 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 SNORD21-201ENST00000383953 95 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.506-201ENST00000384494 102 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RNU6-125P-201ENST00000384505 107 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 MIR4506-201ENST00000584693 77 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 AC006023.1-201ENST00000603944 259 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 AC021753.1-201ENST00000635724 168 ntBASIC2.79□□□□□ -1.96
NDC1Q9BTX1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NDC1Q9BTX1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
NDC1Q9BTX1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
NDC1Q9BTX1 RNU1-35P-201ENST00000362782 153 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 SNORD115-30-201ENST00000364117 82 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 TOMM22P2-201ENST00000430735 237 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 AL139132.1-201ENST00000431587 344 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.637-201ENST00000459424 114 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 HMGB3P3-201ENST00000510526 400 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 RNU6-1219P-201ENST00000516143 112 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 Y_RNA.703-201ENST00000516846 111 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.78□□□□□ -1.96
NDC1Q9BTX1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.78□□□□□ -1.96
NDC1Q9BTX1 MRPS18CP4-201ENST00000535821 231 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 MIR5692C2-201ENST00000577959 77 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 U2.22-201ENST00000636441 106 ntBASIC2.78□□□□□ -1.96
NDC1Q9BTX1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
NDC1Q9BTX1 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms