Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 U2.20-201ENST00000613956 192 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDPF1Q6NVV7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 SNORD113.2-201ENST00000364166 89 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.328-201ENST00000365208 113 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 SNORD61-201ENST00000384252 73 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 SNORD72-201ENST00000390994 80 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 U3.30-201ENST00000391308 210 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 HMGN1P7-201ENST00000491722 313 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 AC026726.1-201ENST00000512859 601 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 SNORA4.4-201ENST00000515921 135 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 RNU6-965P-201ENST00000516721 96 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 MIR4715-201ENST00000584117 79 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 AP001318.4-201ENST00000616637 121 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 AP005019.3-201ENST00000620418 560 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 AC009831.4-201ENST00000620744 325 ntBASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.13□□□□□ -1.91
CDPF1Q6NVV7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 RNU6-640P-201ENST00000363693 105 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.163-201ENST00000363702 113 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 RNU1-96P-201ENST00000364163 162 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 RNU1-132P-201ENST00000364300 164 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 SNORD73B-201ENST00000364394 72 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 RNU6-756P-201ENST00000383997 107 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 RNU11-5P-201ENST00000391216 129 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 MIR1253-201ENST00000408273 105 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 AC096725.1-201ENST00000514266 313 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 MIR4277-201ENST00000578298 84 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 AL137067.1-201ENST00000615933 120 ntBASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDPF1Q6NVV7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.242-201ENST00000364473 110 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 U8.6-201ENST00000364939 135 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 MIR1302-5-201ENST00000408164 150 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 MICF-203ENST00000432679 129 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 RNU6-1149P-201ENST00000516810 97 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 RNU6-856P-201ENST00000516959 98 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 MIR5699-201ENST00000578903 90 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 MIR7703-201ENST00000620784 77 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 AC080128.1-201ENST00000474389 1917 ntBASIC3.11□□□□□ -1.91
CDPF1Q6NVV7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 RNU6-546P-201ENST00000383991 107 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.549-201ENST00000384657 102 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.621-201ENST00000411065 96 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AC123900.1-201ENST00000420390 96 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 SNRPGP10-201ENST00000432323 225 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AL500522.2-201ENST00000448562 343 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AC093259.1-201ENST00000509755 300 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 PHBP14-201ENST00000512887 367 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 SCARNA15-202ENST00000516881 127 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 RNU6-1270P-201ENST00000517128 108 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AC008507.4-201ENST00000585464 127 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 AC073413.2-201ENST00000604332 360 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 RNU6-94P-201ENST00000607728 107 ntBASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms