Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SNORD115-21-201ENST00000362963 81 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-41-201ENST00000363608 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-11-201ENST00000363616 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-5-201ENST00000363633 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-4-201ENST00000363810 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-6-201ENST00000363942 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-42-201ENST00000364273 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-15-201ENST00000364809 81 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-26-201ENST00000365067 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-10-201ENST00000365073 81 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-43-201ENST00000365503 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORD115-36-201ENST00000365629 82 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORA70F-201ENST00000384142 135 ntBASIC4.9□□□□□ -1.63
CD44P16070 SNORA80E-201ENST00000384744 137 ntBASIC4.9□□□□□ -1.63
CD44P16070 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.9□□□□□ -1.63
CD44P16070 AC079150.2-201ENST00000443733 78 ntBASIC4.9□□□□□ -1.63
CD44P16070 MIR4796-201ENST00000580742 81 ntBASIC4.9□□□□□ -1.63
CD44P16070 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.9□□□□□ -1.63
CD44P16070 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CD44P16070 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.9□□□□□ -1.63
CD44P16070 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.9□□□□□ -1.63
CD44P16070 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD44P16070 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD44P16070 SNORA7.2-201ENST00000364446 145 ntBASIC4.89□□□□□ -1.63
CD44P16070 SNORD115-31-201ENST00000365318 82 ntBASIC4.89□□□□□ -1.63
CD44P16070 RNU6-1241P-201ENST00000384536 107 ntBASIC4.89□□□□□ -1.63
CD44P16070 HMGN2P8-201ENST00000391458 268 ntBASIC4.89□□□□□ -1.63
CD44P16070 MIR1911-201ENST00000410783 80 ntBASIC4.89□□□□□ -1.63
CD44P16070 AC011753.3-201ENST00000443436 406 ntBASIC4.89□□□□□ -1.63
CD44P16070 RN7SL826P-201ENST00000479724 288 ntBASIC4.89□□□□□ -1.63
CD44P16070 AC015795.1-201ENST00000513669 327 ntBASIC4.89□□□□□ -1.63
CD44P16070 RNU6-826P-201ENST00000516827 104 ntBASIC4.89□□□□□ -1.63
CD44P16070 AC134698.5-201ENST00000519444 336 ntBASIC4.89□□□□□ -1.63
CD44P16070 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.89□□□□□ -1.63
CD44P16070 AC096644.4-201ENST00000563417 2912 ntBASIC4.89□□□□□ -1.63
CD44P16070 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD44P16070 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
CD44P16070 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CD44P16070 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 RNU1-15P-201ENST00000353977 144 ntBASIC4.88□□□□□ -1.63
CD44P16070 MIR124-3-201ENST00000384866 87 ntBASIC4.88□□□□□ -1.63
CD44P16070 AC060773.1-201ENST00000421698 310 ntBASIC4.88□□□□□ -1.63
CD44P16070 RPEP3-201ENST00000425462 676 ntBASIC4.88□□□□□ -1.63
CD44P16070 RPS26P28-201ENST00000470806 348 ntBASIC4.88□□□□□ -1.63
CD44P16070 AC078918.1-201ENST00000498515 228 ntBASIC4.88□□□□□ -1.63
CD44P16070 RNU6-856P-201ENST00000516959 98 ntBASIC4.88□□□□□ -1.63
CD44P16070 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.88□□□□□ -1.63
CD44P16070 AP001005.3-201ENST00000622049 129 ntBASIC4.88□□□□□ -1.63
CD44P16070 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.88□□□□□ -1.63
CD44P16070 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CD44P16070 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD44P16070 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD44P16070 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD44P16070 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD44P16070 Y_RNA.508-201ENST00000384502 114 ntBASIC4.87□□□□□ -1.63
CD44P16070 RNU6-1274P-201ENST00000384557 107 ntBASIC4.87□□□□□ -1.63
CD44P16070 MIR154-201ENST00000385243 84 ntBASIC4.87□□□□□ -1.63
CD44P16070 SNORD66.1-201ENST00000391230 76 ntBASIC4.87□□□□□ -1.63
CD44P16070 HLA-N-201ENST00000437516 135 ntBASIC4.87□□□□□ -1.63
CD44P16070 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.87□□□□□ -1.63
CD44P16070 RAC1P2-201ENST00000511164 579 ntBASIC4.87□□□□□ -1.63
CD44P16070 RNA5SP497-201ENST00000516081 97 ntBASIC4.87□□□□□ -1.63
CD44P16070 FAM106DP-201ENST00000586416 501 ntBASIC4.87□□□□□ -1.63
CD44P16070 MIR7703-201ENST00000620784 77 ntBASIC4.87□□□□□ -1.63
CD44P16070 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.87□□□□□ -1.63
CD44P16070 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.87□□□□□ -1.63
CD44P16070 MAPK10-286ENST00000641208 8747 ntBASIC4.86□□□□□ -1.63
CD44P16070 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CD44P16070 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD44P16070 RNA5SP133-201ENST00000363368 119 ntBASIC4.86□□□□□ -1.63
CD44P16070 MIR298-201ENST00000401212 88 ntBASIC4.86□□□□□ -1.63
CD44P16070 ABCF2P2-201ENST00000450549 296 ntBASIC4.86□□□□□ -1.63
CD44P16070 snoU13.28-201ENST00000459235 104 ntBASIC4.86□□□□□ -1.63
CD44P16070 PPIAP15-201ENST00000479662 484 ntBASIC4.86□□□□□ -1.63
CD44P16070 AL671862.1-201ENST00000515851 349 ntBASIC4.86□□□□□ -1.63
CD44P16070 SNORA4.4-201ENST00000515921 135 ntBASIC4.86□□□□□ -1.63
CD44P16070 AC069240.1-201ENST00000548774 375 ntBASIC4.86□□□□□ -1.63
CD44P16070 AC012676.2-201ENST00000619258 186 ntBASIC4.86□□□□□ -1.63
CD44P16070 NEAT1_2.1-201ENST00000620525 105 ntBASIC4.86□□□□□ -1.63
CD44P16070 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD44P16070 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CD44P16070 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD44P16070 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD44P16070 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD44P16070 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.86□□□□□ -1.63
CD44P16070 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.86□□□□□ -1.63
CD44P16070 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 AC002546.1-201ENST00000588041 2504 ntBASIC4.85□□□□□ -1.63
CD44P16070 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CD44P16070 Y_RNA.332-201ENST00000365271 113 ntBASIC4.85□□□□□ -1.63
CD44P16070 SNORA2B-201ENST00000384583 137 ntBASIC4.85□□□□□ -1.63
CD44P16070 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD44P16070 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms