Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM13O60858 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM13O60858 AL162713.1-201ENST00000604480 262 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 SNORD11B-201ENST00000607707 90 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM13O60858 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM13O60858 AC068205.3-201ENST00000636385 468 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM13O60858 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
TRIM13O60858 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM13O60858 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.9
TRIM13O60858 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM13O60858 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM13O60858 U8.1-201ENST00000362843 134 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 Y_RNA.114-201ENST00000363265 113 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 Y_RNA.120-201ENST00000363304 110 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 SNORD45.3-201ENST00000363836 72 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM13O60858 RNU6-880P-201ENST00000384526 107 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 RNY4P30-201ENST00000410216 95 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 RNU6-383P-201ENST00000410864 94 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 TOMM22P2-201ENST00000430735 237 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 HMGN2P20-201ENST00000437531 273 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 AC006028.1-201ENST00000438379 402 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM13O60858 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 SNORD19.2-201ENST00000516978 73 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 RNU6-537P-201ENST00000517277 103 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM13O60858 MIR4474-201ENST00000579189 78 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 MIR378D2-201ENST00000580636 98 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 AC068724.3-201ENST00000625906 87 ntBASIC3.15□□□□□ -1.91
TRIM13O60858 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM13O60858 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.15□□□□□ -1.91
TRIM13O60858 AC138915.1-201ENST00000565427 1685 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM13O60858 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRIM13O60858 SNORD73B-201ENST00000364394 72 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 RNU6-1336P-201ENST00000383886 109 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
TRIM13O60858 CBX3P9-201ENST00000402326 552 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM13O60858 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 RNU6-1077P-201ENST00000410506 102 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM13O60858 AC092185.1-201ENST00000491371 97 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 AC093663.1-201ENST00000497190 394 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.14□□□□□ -1.91
TRIM13O60858 MIR3160-1-201ENST00000577972 85 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 MIR4276-201ENST00000584832 70 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 VN1R85P-201ENST00000601587 426 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 AC025754.2-201ENST00000606491 432 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 uc_338.28-201ENST00000612082 187 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 MIR6810-201ENST00000622701 70 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 U6.115-201ENST00000636045 103 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 Z82209.1-201ENST00000422141 2135 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
TRIM13O60858 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM13O60858 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM13O60858 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM13O60858 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM13O60858 MIR1278-201ENST00000408753 81 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 Y_RNA.617-201ENST00000410920 90 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 AC023141.4-201ENST00000412031 328 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 CYCSP48-201ENST00000417124 323 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 MLLT10P1-201ENST00000418346 262 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 RN7SKP21-201ENST00000516503 220 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM13O60858 MIR3923-201ENST00000579521 83 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 AL031274.2-201ENST00000599419 203 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 AL121890.5-201ENST00000620848 304 ntBASIC3.13□□□□□ -1.91
TRIM13O60858 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM13O60858 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TRIM13O60858 RNA5SP124-201ENST00000362739 110 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 RNU6-978P-201ENST00000364371 103 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 MIR218-2-201ENST00000385006 110 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 RNA5SP252-201ENST00000391131 119 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 Y_RNA.622-201ENST00000411091 108 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 AC107626.1-201ENST00000471084 183 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 AIG1P1-201ENST00000503376 148 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 SNORA70.12-201ENST00000516084 153 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 RNU2-60P-201ENST00000517290 128 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.12□□□□□ -1.91
TRIM13O60858 MIR2682-201ENST00000580305 110 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 U3.45-201ENST00000607547 219 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 uc_338.25-201ENST00000613756 156 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 MIR548AY-201ENST00000617669 107 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 AC005562.2-201ENST00000618264 111 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
TRIM13O60858 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM13O60858 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms