Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 MIR1294-201ENST00000408503 142 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 RPL19P1-201ENST00000411635 428 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 RPL30P4-201ENST00000429309 333 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU1-117P-201ENST00000517041 158 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 AC091932.3-201ENST00000624223 323 ntBASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TCRBV5S1A1TA0A578 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 Y_RNA.136-201ENST00000363444 102 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-200P-201ENST00000364743 107 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 SNORD87-201ENST00000364849 89 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 MT-TR-201ENST00000387439 65 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU2-54P-201ENST00000410299 190 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 AC018634.1-201ENST00000437554 401 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU5F-4P-201ENST00000516581 114 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-586P-201ENST00000517265 104 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 AC006380.1-201ENST00000603598 186 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 AC009779.6-201ENST00000603972 165 ntBASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TCRBV5S1A1TA0A578 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 RNY1-201ENST00000364228 113 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 SNORA67.2-201ENST00000384300 149 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 RNA5SP504-201ENST00000410676 117 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 AC009310.1-201ENST00000414414 451 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 RPL23AP3-201ENST00000453844 468 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-155P-201ENST00000516347 100 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 AP002001.1-203ENST00000534002 267 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 MIR3199-1-201ENST00000582434 88 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 AL133393.1-201ENST00000603277 287 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 AL713866.2-201ENST00000603579 219 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 AC046143.2-201ENST00000609789 160 ntBASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
TCRBV5S1A1TA0A578 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU1-72P-201ENST00000362976 153 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 U3.8-201ENST00000363675 217 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 Y_RNA.269-201ENST00000364685 89 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-1274P-201ENST00000384557 107 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU2-14P-201ENST00000411053 191 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-1199P-201ENST00000411249 104 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 MRPS10P1-201ENST00000448483 130 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 NDUFB4P10-201ENST00000452541 359 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 SNORA27.4-201ENST00000516650 95 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-1098P-201ENST00000516772 96 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 MIR4643-201ENST00000577473 78 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AC105245.1-201ENST00000581934 244 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 MIR4672-201ENST00000583126 81 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AL512605.2-201ENST00000592972 256 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AL109918.3-201ENST00000603072 338 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AC069294.1-201ENST00000608397 350 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 MIR5739-201ENST00000619803 80 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.48□□□□□ -2.01
TCRBV5S1A1TA0A578 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 AC080128.1-201ENST00000474389 1917 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-1305P-201ENST00000364353 104 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 Y_RNA.418-201ENST00000384029 102 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 Y_RNA.510-201ENST00000384511 114 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 MIR586-201ENST00000385035 97 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 TOMM22P2-201ENST00000430735 237 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 MTCO1P5-201ENST00000433573 344 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 AC080013.2-201ENST00000460866 323 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6-138P-201ENST00000515952 107 ntBASIC2.47□□□□□ -2.01
TCRBV5S1A1TA0A578 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 255.6 ms