Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.60-201ENST00000362831 98 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.332-201ENST00000365271 113 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.418-201ENST00000384029 102 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 MT-TG-201ENST00000387429 68 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC123900.1-201ENST00000420390 96 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL139281.1-201ENST00000422120 335 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 AL049873.1-201ENST00000480540 376 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 Y_RNA.673-201ENST00000516306 88 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 RNU6-948P-201ENST00000516374 107 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 AC010900.2-201ENST00000604508 210 ntBASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
IGHV4-28A0A0C4DH34 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
IGHV4-28A0A0C4DH34 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.09□□□□□ -2.08
IGHV4-28A0A0C4DH34 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC096644.4-201ENST00000563417 2912 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL035425.3-201ENST00000564206 4996 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORA25.1-201ENST00000362326 128 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORD115-30-201ENST00000364117 82 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-326P-201ENST00000365480 107 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.476-201ENST00000384347 108 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-1235P-201ENST00000384559 107 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC139712.2-201ENST00000424302 339 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL135938.1-201ENST00000443141 297 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 MTND4LP30-201ENST00000454092 297 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-498P-201ENST00000459468 107 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-221P-201ENST00000459541 99 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC090115.4-201ENST00000609970 188 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 SCARNA15.3-201ENST00000626315 122 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 SCARNA4.1-201ENST00000628597 123 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 U6.115-201ENST00000636045 103 ntBASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.08□□□□□ -2.08
IGHV4-28A0A0C4DH34 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.54-201ENST00000362766 105 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-379P-201ENST00000363813 104 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORA80A-201ENST00000363922 136 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORD27-201ENST00000363981 72 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.329-201ENST00000365209 107 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-514P-201ENST00000384208 107 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.489-201ENST00000384410 101 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL031003.1-201ENST00000404229 172 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL603910.2-201ENST00000407268 136 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 MIR548H3-201ENST00000408771 118 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 MTCO1P5-201ENST00000433573 344 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 MTCO1P44-201ENST00000441935 243 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-436P-201ENST00000516171 114 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNA5SP367-201ENST00000516557 118 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 SCARNA13-201ENST00000516672 275 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 RPPH1-2P-201ENST00000516688 293 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 NDUFA5P6-201ENST00000542110 379 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 MIR4506-201ENST00000584693 77 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC090425.1-201ENST00000610007 140 ntBASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.07□□□□□ -2.08
IGHV4-28A0A0C4DH34 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 MIR340-201ENST00000362125 95 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-1266P-201ENST00000362794 105 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU4-80P-201ENST00000363200 141 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.136-201ENST00000363444 102 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORA5B-201ENST00000363786 132 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORA38-201ENST00000363946 132 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.243-201ENST00000364481 109 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 SNORA20.1-201ENST00000364790 130 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 Y_RNA.352-201ENST00000365439 102 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 MIR1262-201ENST00000408276 93 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 SRIP3-201ENST00000413200 219 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC087499.2-201ENST00000432861 149 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 RNU6-1023P-201ENST00000516137 106 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 RPL21P9-201ENST00000556149 474 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL033523.1-201ENST00000605153 153 ntBASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.06□□□□□ -2.08
IGHV4-28A0A0C4DH34 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms