Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 YBX1P2-201ENST00000489612 999 ntBASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC068587.9-201ENST00000641814 219 ntBASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TNFRSF11AQ9Y6Q6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
TNFRSF11AQ9Y6Q6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TNFRSF11AQ9Y6Q6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.14■■□□□ 1.3
TNFRSF11AQ9Y6Q6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TNFRSF11AQ9Y6Q6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
TNFRSF11AQ9Y6Q6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TNFRSF11AQ9Y6Q6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 LIN28AP1-201ENST00000429574 405 ntBASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TNFRSF11AQ9Y6Q6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ATP5G1P1-201ENST00000448724 379 ntBASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AL445228.2-201ENST00000605589 952 ntBASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 MTMR9LP-203ENST00000426597 1545 ntBASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TNFRSF11AQ9Y6Q6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 BX664615.1-201ENST00000443558 458 ntBASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 KRT18P38-201ENST00000449496 1282 ntBASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.12■■□□□ 1.29
TNFRSF11AQ9Y6Q6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 KRT18P35-201ENST00000510488 1269 ntBASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AC098818.2-201ENST00000564925 2320 ntBASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11AQ9Y6Q6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms